XLOC_004282


Basic Information

Item Value
gene id XLOC_004282
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 37475513 ~ 37476968 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00008847
tgggtttagggttagggtaggtgtagatggCATTGATAAACACAACAGGTTAGTgaaaggttgggtttagggttagggtaggtgtagatgaCATTGATAAACAACAGGTTAgtgtaaggttgggtttagggttgggataggTGAAATAGGCATTATTATATCAATAGGTTTCTgtggggttgggtttaggtttggggcaggtgtagacgttaacaaaacaaaaaggctaCTAtgaggttgagtttagggttgcattaggtgtagatgttaatataaATTAACAGGTTACTgtggggttgggtttagggttgtggtaggtgtagacattcataGAACAAAATAGgttggactccatgtcatgtacaagacattaaataaatgaaaattgcaGGAGGTTTGCCCACTTTTGGAGCTGTCTCTGACCTCCGTTTATACCCTTCTGAATTTTTCCAATATGATGCATCCCTAATCAGCAAAAATAAAGGCCTGCAAAATTAAAGCAGGGGATAAAATCTCCaactgtttgtttgcttttttaatgtcagTGTTACTATATTTGGAAACTCCGCATTCCAGTTAATCAACCCAAATGCCCAGATATTAATTATATTGTGGACACTTGTTTACTCATTAAGTGGTGCTTGTCAGCATGCATATGACATATAATTATCTCATTACGGCTAATAGTATGACCGTCCTGTAGAGCTGTGGTGCTGTAAGGGGTGAAGTGTCTGGGATGTAATCTAAATGCTTCACCGCTGTGCCTTCACACTTACCCACAGGTGGCTGGAGCAAATGTGCTGTAATTTGCTTGGGATataagtgtctgctaaatgacaaacAGCCAGATGAGCATATGCTACCATCCAGCGTTGCAGCTTTCTTATTAGACTTTCTCTGGCTGTCAGGAGTCAGATATATTTGGGTTGAGAGACCAGTGCTAGAAGGTGTAGTCAAGATCTGGGCACTCAGGTAATCAGAGAGCATTATGGGCCGTGTGAAGCCGCTGTTCAGGGCAACAGCTTCACACGGCACTTACTTCATTACTGATAACATCTGATATGGTCTGCGgtctgtattgtgtgtgtgtgtgtgtatgtgtgttgtctGTCACAGAGCGTCTGTGCGATTTCATTTTCAAGCGACTGATGCACAGCGACACAAGCCGTAAATAAAGAGCGCAAATACATGACCCTGCCCTGCATCGGCCCTGAGAGGCAAAAACAGCGCCTGCTTAATCACTGATGACAGCCTGTTATCCTGCAGCGACACACATGTACTGGaccaattgtgtgtgtgtgtgtatatatatatatgtgtgtgtgtgtgtgtgtgagtaaggctgagtaattaacttttatttttgcagttttttttggtCAAAGAAGTTAAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00008847 True 1393 lncRNA 0.42 2 37475513 37476968

Neighbor

gene id symbol gene type direction distance location
XLOC_004280 erc2 coding downstream 50106 37310881 ~ 37425407 (-)
XLOC_004279 CR352285.2 coding downstream 176028 37299371 ~ 37299485 (-)
XLOC_004278 CR352285.1 coding downstream 177416 37297501 ~ 37298097 (-)
XLOC_004277 NINJ1 coding downstream 354559 37105640 ~ 37120954 (-)
XLOC_004276 NA coding downstream 379979 37085620 ~ 37095534 (-)
XLOC_004283 NA coding upstream 116040 37593008 ~ 37603981 (-)
XLOC_004284 NA coding upstream 136579 37613547 ~ 37614538 (-)
XLOC_004285 zgc:158258 coding upstream 206310 37683278 ~ 37693019 (-)
XLOC_004286 yod1 coding upstream 231416 37708384 ~ 37720266 (-)
XLOC_004287 NA coding upstream 303610 37780578 ~ 37827473 (-)
XLOC_004063 CR854846.1 misc downstream 21347835 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 24783822 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 24853746 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 24884217 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 24962251 12512966 ~ 12513262 (-)
XLOC_004275 BX248521.1 non-coding downstream 430974 37038420 ~ 37044539 (-)
XLOC_004274 BX248521.2 non-coding downstream 460006 37010161 ~ 37015507 (-)
XLOC_004290 NA non-coding upstream 507983 37984951 ~ 37987558 (-)
XLOC_004292 AL928854.1 non-coding upstream 562996 38039964 ~ 38041422 (-)

Expression


Co-expression Network