LOC118949586


Basic Information

Item Value
gene id LOC118949586
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493744.1
NCBI id JAAXML020000268.1
chromosome length 227073
location 173454 ~ 176869 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036973707.1
ATGTTTGAGCCCACTGTCGCGTCCAAActgtcctccagtactcccaacGGCCATCAGTCCTCCGTAAACCCCAACGGCCATCAGGCCTCCAGTACTCCCAACAGCCATcagtcctccagtactcccaacaGCCATCAGTCCTCCATAAACCCCAACGGCCATcagtcctccagtactcccaacaGCCATCAtaaccccaacgGCCATCAGTCCTCCATAAACCCCAATGGCCATcagtcctccagtactcccaacaGCCATCAGTCCTCCAGTAGTCTCAACAGCCATcagtcctccagtactcccaacaGCCATCAGTCCTCCAATACCTCCAATGGTCATcagtcctccagtaaccccaacgGCCATCAGGCCTCCAGTACTCCCAACAGCCATCAGTCCTCCAGTACTCCCGACAGCCATcagtcctccagtaaccccaacagccatcagtcctccagtaaccccaacgGTCATCAGTCCTCCATAAACCCCAATGGCCATcagtcctccagtactcccaacaGCCATCAGTCCTCCAGTAGTCTCAACAGCCATcagtcctccagtactcccaacaGCCATCAGTCCTCCAATACCTCCAATGGTCATcagtcctccagtaaccccaacgGTCATCAGTCCTCCAGTAACCCAAACAGCCATCAGTCCTCCAATACCTCCAACGGTCATcagtcctccagtaaccccaacgGTCATCCGTCCTACAGTACTCCCAACAGCCATCAGTCCTCCAGTAACTCCAAAAGCCATcagtcctccagtactcccaacagccatcagtcctccagtaaccccaacgGTCATCAGTCCTCCATAAACTCCAACGGCCATcagtcctccagtactcccaacaGCCATCAGTCCTCCTGTAACCCCAACGGCCATCAGTCCTCCATAAATCCCAACGGCCATCACCATCAGTCCTCCAGTAGACCCAACGGTCATCAGTCTTCCAATACCTCCAACGGTCATCAGTCCTCCAGTAACACCAACGGTCATCAGTTCTCCAGTAACCCCAACAGCCATcagtcctccagtaaccccaacagCCATCAGACCTCCAGTACTCCCAACAGCCATCAGTCCTCCAGTAGACCCAACGGTCATCAGTCTTCCAATACCTCCAACGGTCATCAGTCCACCAGCAACCCCAACGGTCATCAGTTCTCCAGTAACCCCAACGGCCATcagtcctccagtactcccaacagccatcagtcctccagtaaccccaacTGCCATCAGTCCTCCAGTACTCTCAACAGCCATCAGTCCTCCAGTAGTCCCAACAGCCATcagtcctccagtactcccaacaGCCATCAGTCCTCCAGTAGACCCAATGGTCATCAGTCCTCCAATACCCCCAACGGTCATCAGTCATCCAGTAACCCCAATGGTCATCCgtcctccagtaaccccaacgGTAATcataaccccaacgGTCATCAGTCCTCCATAAACCCCAACGGCCATCAGTCCTCCAGTAGTCCCAACAGCCATCAGACCTCCAGTACTCCCAACAGCCATAAGTCCTCCAGTAGACACAACGGTCATCAGTCCTCCAATACCTCCAACGGTCATcagtcctccagtaaccccaacgATCATCATTCCTCCAGTAGTCCCAACAGCCATCAGTCCTCCAATACCTCCAACGGTCATcagtcctccagtaaccccaacgATCATCATTCCTCCAGTAGTCCCAACAGCCATCAGTCCTCCAATACCTCCAACGGCCATCAGTCCTCCAGTACTCTCAACAGCCATCAGACCTCCAGTACTCCCAACAGCCATCAGTCCTCCATAAACTCCAACGGCCATCAGTCCTCCAGTAACCCAACGGTCATcagtcctccagtaaccccaactgccatcagtcctccagtactcccaacaGCCATCAGTCCTCCAGTAGTCCCAACAGCCATcagtcctccagtactcccaacaGCCATCAGTCCTCCAGTAGACCCAATGGTCATCAGTCCTCCAATACCCCCAACGGTCATCAGTCATCCAGTAACCCCAATGGTCATCCgtcctccagtaaccccaacgTCCTCCATAAACCCCAACGGCCATCAGTCCTCCAGTAGTCCCAACAGCCATCAGACCTCCAGTACTCCCAACAGCCATAAGTCCTCCAGTAGACACAACGGTCATCAGTCCTCCAATACCTCCAACGGTCATcagtcctccagtaaccccaacgATCATCATTCCTCCAGTAGTCCCAACAGCCATCAGTCCTCCAATACCTCCAACGGTCATcagtcctccagtaaccccaacgATCATCATTCCTCCAGTAGTCCCAACAGCCATCAGTCCTCCAATACCTCCAACGGCCATCAGTCCTCCAGTACTCTCAACAGCCATCAGACCTCCAGTACTCCCAACAGCCATCAGTCCTCCATAAACTCCAACGGCCATCAGTCCTCCAGTAACCCAACGGTCATCAGTCCTCCAGTAGTCTCAACAGCCATCAttcctccagtactcccaacaGCCATCAGTCCTCCAGTATTCCCAACAGCCATCAGTGCTCCAGTAGTCTCAACAGCCATCAGTCCTCCAGTAGTCCCAACAGCCATCAGTTCTCCATAA

Function

NR:

description
mesothelin isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036973707.1 True 2637 mRNA 0.54 6 173454 176869

Neighbor

gene id symbol gene type direction distance location
LOC110524342 LOC106585892 coding upstream 162818 7942 ~ 10636 (+)
G2363465 NA non-coding upstream 4916 76805 ~ 168538 (+)
G2363491 NA non-coding upstream 18445 150369 ~ 155009 (+)
G2363479 NA non-coding upstream 42169 130403 ~ 131285 (+)
G2363461 NA non-coding upstream 101993 70387 ~ 71461 (+)
G2363450 NA non-coding upstream 118447 50684 ~ 55007 (+)
G2363557 NA other upstream 906 171854 ~ 172548 (+)
G2363473 NA other upstream 83196 87323 ~ 90258 (+)

Expression

LOC118949586 Expression in all Baseline Samples

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LOC118949586 Expression in each Bioproject

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LOC118949586 Expression in each Sample
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Co-expression Network