XLOC_004303 (si:ch211-122l14.7)


Basic Information

Item Value
gene id XLOC_004303
gene name si:ch211-122l14.7
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 38922744 ~ 38924944 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00008205
AAATTGGCGCTAAGCTGGGCAAAGGAGGCTTTGGAACCGTTTACACTGGGACCCGTATAAAAGATCGCCTTCCGGTGGCATTAAAAGTGGCTGACTTCAAGGTTAAGCAATTCATCCAAGTTGATGATTTTCTCCAGCCACTTCCAGCGGAGATCGCTCTGCACTTTCTTGCCTCTAAAGGCCCCAAAGCTAAACCAATTGTTAAGCTTCTGGACTGGAAAGTGGAGGCTAATCGTTACTTACTAGTCCTAGAGCGGCCCGTACCCTGTGAGAACTTATGGGAATTTCTATGTAAATACGACGGTAGAATCCCAGAGAAGATATTATGGAAAATCATGTTCCATACAACAATTGCAGCTGACATCTGCTGCAAACGTGGAGTGCTTCACCGCGATATCAAGGCTGAGAATTTGCTGATTAACCTGCGGACCCATCAAGTCAAACTGACTGACTTTGGGTGTGGTGAACGCCTTACTAGGAGCTGTTACAAAGAGTACTGCGGCACACCACAGTACTGCCCTCCCGAGTTCAATAGCACTGGCTTATACTACGGGGAGCCAGCGACAGTGTGGTCACTCGGGATTCTTCAATATTTGCTGATGTTCAAAAAATTTCCAGACTACCATGACCTCCAAAACTTGACTTTCACAAATTTAGGGCAATATGGATGGTCAAAAGAATGCTGTGATTTTATTAGCTGTTGTTTGCAGACTGACTACCAACTTCGGTCTAAGCTGCAAACACTCCGTACCCATGACTGGTTTAAGGCGGAGAACAAGCCGCAATGAGGAGAGATGTCCTTTTTTAATAGGTGGATCTAGCCAGTCCATCCATGCCACCATAGTCCTTTAGCTAAACATATCTTCATCCATTACAACCTTATAGAGAGAAAGCTGAACATAATTTGGT

Function

symbol description
si:ch211-122l14.7 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO:

id name namespace
GO:0043066 negative regulation of apoptotic process biological_process
GO:0006468 protein phosphorylation biological_process
GO:0007346 regulation of mitotic cell cycle biological_process
GO:0016310 phosphorylation biological_process
GO:0046777 protein autophosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-041014-263 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

Ensembl:

ensembl_id ENSDARG00000095576

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00008205 True 909 mRNA 0.45 5 38922744 38924944

Neighbor

gene id symbol gene type direction distance location
XLOC_004302 si:ch211-122l14.4 coding downstream 8479 38912133 ~ 38914265 (-)
XLOC_004301 pimr126 coding downstream 12217 38908406 ~ 38910527 (-)
XLOC_004300 pimr127 coding downstream 22928 38893819 ~ 38899816 (-)
XLOC_004299 nucks1a coding downstream 368350 38540138 ~ 38554394 (-)
XLOC_004298 slc45a3 coding downstream 389239 38517255 ~ 38533505 (-)
XLOC_004304 si:ch211-122l14.6 coding upstream 1780 38926724 ~ 38928760 (-)
XLOC_004305 AL845324.2 coding upstream 23043 38947987 ~ 38949751 (-)
XLOC_004306 cldn19 coding upstream 88819 39013763 ~ 39044595 (-)
XLOC_004307 p3h1 coding upstream 150669 39075613 ~ 39105253 (-)
XLOC_004308 CU210919.2 coding upstream 164931 39089875 ~ 39089991 (-)
XLOC_004063 CR854846.1 misc downstream 22795066 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 26231053 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 26300977 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 26331448 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 26409482 12512966 ~ 12513262 (-)
XLOC_004295 NA non-coding downstream 496941 38339439 ~ 38425803 (-)
XLOC_004294 NA non-coding downstream 723857 38149889 ~ 38198887 (-)
XLOC_004293 NA non-coding downstream 835731 38084872 ~ 38087013 (-)
XLOC_004292 AL928854.1 non-coding downstream 881322 38039964 ~ 38041422 (-)
XLOC_004290 NA non-coding downstream 935186 37984951 ~ 37987558 (-)
XLOC_004311 NA non-coding upstream 283240 39208184 ~ 39212765 (-)
XLOC_004312 NA non-coding upstream 378653 39303597 ~ 39305163 (-)
XLOC_004313 CR847998.1 non-coding upstream 712796 39637740 ~ 39645310 (-)

Expression


Co-expression Network