XLOC_000431


Basic Information

Item Value
gene id XLOC_000431
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 36966000 ~ 36966282 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00002856
ttttacttggtgaAAAAAACCAAGAGATATTTGAAAATTCTCAATTTCTTTGGATctacaatttatatttatttgtttgaataaaacatAATTGATGATTTGTTCTCCAGTTAACTGATAAGATTTCTttaaaatggaagaaaaaaaatcatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatattcatataaaataacaaaaatttacgTTTTCTTTAGTTACATTATTTTTACAct

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00002856 True 283 lncRNA 0.15 1 36966000 36966282

Neighbor

gene id symbol gene type direction distance location
XLOC_000430 arhgap10 coding upstream 52909 36771954 ~ 36913091 (+)
XLOC_000429 tmem184c coding upstream 219431 36722122 ~ 36746569 (+)
XLOC_000428 ednraa coding upstream 263645 36612660 ~ 36702355 (+)
XLOC_000427 pou4f2 coding upstream 525699 36436936 ~ 36440301 (+)
XLOC_000426 lsm6 coding upstream 762000 36194761 ~ 36204000 (+)
XLOC_000432 FO704615.1 coding downstream 157360 37123642 ~ 37123772 (+)
XLOC_000433 dclk2a coding downstream 229183 37195465 ~ 37310490 (+)
XLOC_000434 fam193a coding downstream 346298 37312580 ~ 37362246 (+)
XLOC_000435 sparcl1 coding downstream 424859 37391141 ~ 37419873 (+)
XLOC_000436 NA coding downstream 624976 37591258 ~ 37638367 (+)
XLOC_000425 BX324156.1 non-coding upstream 811623 36154261 ~ 36154377 (+)
XLOC_000421 NA non-coding upstream 1067563 35896392 ~ 35898437 (+)
XLOC_000415 NA non-coding upstream 1872488 35034294 ~ 35093512 (+)
XLOC_000414 NA non-coding upstream 2104943 34857368 ~ 34861057 (+)
XLOC_000408 NA non-coding upstream 2511553 34450659 ~ 34454447 (+)
XLOC_000439 NA non-coding downstream 867065 37833347 ~ 37834392 (+)
XLOC_000440 CT583668.1 non-coding downstream 1030177 37996459 ~ 37996577 (+)
XLOC_000442 NA non-coding downstream 1205575 38171857 ~ 38324035 (+)

Expression


Co-expression Network