XLOC_004313 (CR847998.1)


Basic Information

Item Value
gene id XLOC_004313
gene name CR847998.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 39637740 ~ 39645310 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00008214
GTCAGGACCCCGCAGCTGGGAGAAACCCACCAGACACAAGAGCCTCTTTCACTTTAACTTTCCCTCTTTTTGTGTCTCctatgaaagagagagagtgtgtgtgtgtttgtgccaccGCAGGCCGATAAAGCACCTTTTCTGGTCGTGCAGTGTCAGATTTACGCCCCTCGTTAAGCCGGTGACACCTTCCACCCGAGTCAGGATGGCACAGCGCCCGTCTCATACGGGGCGACACACTATTAAGATTACGCCTCATTAGTGAAGACGAGGCGCTGCTGATGAAAGACACAGAAAAAGGTTGCGCGACGTGCCGACGCTCAGCTGGCTTTGTCCAAACTAACAGCAGCGCTCCTCGAGACGGAGAGGATCATTTGTTTGTGACTTCCGGACACCTGTTACCCACAATTCAAAGACTATTTGTGTCTCTGGTGATAATGGAGAATCCTGTGGAGATTCTGGAGAAACAGGACTGAGTCACACACACCtgctggagacacacacacagccctgTGATGGAgtgacacacatatacacacaacccTTTGAGAGGCTGATTGTTCAGGCAGGGGGAGCCGAATGCATCCGTACGCTTCTGGATGATGTGGATGAATGATGCTCCAGGATTTTACAGGAACCTGCCAAAATGAGCTCCGAGGTCTGCGGTGCATTGATATTTCCCAAACAGTCTCGTTTTCTTTGCATTTTCATAATTAATTTGCTTTTTGagaattaatcatttgttttgtCAAAAGTTTCAGCTTTCAAAACTTTCTCTGTCTGTTTCTGGAGATCGTTTCAGCTCGTAGGTGTGATAATGTTGTGCCAGATTTGACCAGGTGGGCCAAAAATCATCCGTTTTTGGTCTTTATATAAAAAACTTTTCAATTTCACTTGCTTAAAAAGTAAAGTTTAAGAATCTCCCACATGCTGTACCGAGTCTGTTCttattttgtaaaagaaaaaaaaaaagtcagatttccCCATCTGCctgaggctgtggattaaaggtgATAATGTTGTAAATTATGTTAGGTTTTTTTGCACAGATTGATTGTTTCGCTTCATAAGAGTGTGTTTCATCAGTAGGAACaagtattattattgtaattgtgttttttaaCCCTAAAACTGCCATTgctttttctaaaacaaaatcctGTTTTCAGAATAAACATTCAATTGAAGGAGGAAATCAAAAATA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000104784

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00008214 True 1201 lncRNA 0.43 2 39637740 39645310

Neighbor

gene id symbol gene type direction distance location
XLOC_004312 NA coding downstream 332577 39303597 ~ 39305163 (-)
XLOC_004311 NA coding downstream 424975 39208184 ~ 39212765 (-)
XLOC_004310 wnt4 coding downstream 434825 39167846 ~ 39202915 (-)
XLOC_004309 ap5b1 coding downstream 518811 39112341 ~ 39118929 (-)
XLOC_004307 p3h1 coding downstream 532487 39075613 ~ 39105253 (-)
XLOC_004314 uts2b coding upstream 378872 40024182 ~ 40030139 (-)
XLOC_004315 tnfrsf9b coding upstream 442831 40088141 ~ 40101246 (-)
XLOC_004316 fam83e coding upstream 458410 40103720 ~ 40128722 (-)
XLOC_004317 EMP3 coding upstream 489546 40134856 ~ 40172295 (-)
XLOC_004318 znf362a coding upstream 529851 40175161 ~ 40204621 (-)
XLOC_004063 CR854846.1 misc downstream 23510062 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 26946049 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 27015973 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 27046444 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 27124478 12512966 ~ 12513262 (-)
XLOC_004308 CU210919.2 non-coding downstream 547749 39089875 ~ 39089991 (-)
XLOC_004305 AL845324.2 non-coding downstream 687989 38947987 ~ 38949751 (-)
XLOC_004295 NA non-coding downstream 1211937 38339439 ~ 38425803 (-)
XLOC_004319 CT033813.1 non-coding upstream 537371 40182681 ~ 40182796 (-)
XLOC_004323 NA non-coding upstream 815541 40460851 ~ 40462487 (-)
XLOC_004330 FP236327.1 non-coding upstream 1115408 40760718 ~ 40761318 (-)
XLOC_004331 CABZ01083815.1 non-coding upstream 1213344 40858654 ~ 40860470 (-)
XLOC_004332 CABZ01044765.1 non-coding upstream 1248456 40893766 ~ 40895245 (-)

Expression


Co-expression Network