XLOC_004331 (CABZ01083815.1)


Basic Information

Item Value
gene id XLOC_004331
gene name CABZ01083815.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 40858654 ~ 40860470 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00008241
aaaacattatcattAATTTCTATAAAAGTCTTTACAAGTCCATCTAAACAAACAAGTCAAGCTAGATGTTTTTACTGCAATGCACTTGAACACATTTATATAACTGCATGTGTTATAAATTAATTACCAATCTTATTTAggagaaataaatgaaaagacCTCAAGCCTTTTTTGCAATATTAACAtgcaaattttaattatttattttctgttttacagcTTTTTATCTTTTGTAAAAAGGCAGATGCACAAAACTTCAAAAACGTGTCCATTAATAGACTAATGTAAGTCGATTTCTGCTGTATTGCATAGATTGCAAATATTTACCACTGAAAATGACATTAATGTTTTTCCCCATCTAGACAAGGCAGTGTTATTGCCGAAAGCACTGCAGAATATAACTATCCCAACAACAACACCCAAATACAGTTTCTAAATAACAATTTGGGGCAAACGCTTGAAAGAATATTAAATGACTCCGAATCATTTCAAAATCTCAGCGCAGCTCTCAATGCATCAATTGAGGTCACTCGAATAACCATGGGCAAAGTTGAAATATTGAATATTTCACAGGTAAAACCATTTGTGAACTGTCCAGTCAATCTTGAAAACTTAACGCAAGAGCTGGACAATGGAGTATGGGTGTGTGTGGGACCATGCAAAGCAAATCCAGACTTCTGCAATCATCATGGTGAATGCCAAAATGCAATAAATGGCGCAGTGTGCAACTGTACAAGCTCTTACTTTGAGAAGTACTATGGAGATCAGTGCGAGCAGTACAGCAGAGGTCCAGGTTTCTACGCTGTTCTCTTCGGCAGTTTAGCAGCTTTAGCTCTACTCATCATCATTACAGTTGTGATGGTTGTAGTTTTTCACAGAGCCAGAAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000105488

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00008241 True 887 lncRNA 0.36 3 40858654 40860470

Neighbor

gene id symbol gene type direction distance location
XLOC_004330 FP236327.1 coding downstream 97336 40760718 ~ 40761318 (-)
XLOC_004329 tas1r3 coding downstream 116147 40731602 ~ 40742507 (-)
XLOC_004328 ccdc114 coding downstream 130274 40713723 ~ 40728380 (-)
XLOC_004327 si:ch211-222l21.1 coding downstream 162518 40677616 ~ 40696136 (-)
XLOC_004326 prxl2b coding downstream 211417 40622310 ~ 40647237 (-)
XLOC_004332 CABZ01044765.1 coding upstream 33296 40893766 ~ 40895245 (-)
XLOC_004333 NA coding upstream 88419 40948889 ~ 40949818 (-)
XLOC_004334 zgc:175088 coding upstream 217721 41078191 ~ 41084363 (-)
XLOC_004335 dnajc11b coding upstream 249927 41110397 ~ 41132296 (-)
XLOC_004336 CABZ01087025.3 coding upstream 331859 41192329 ~ 41201272 (-)
XLOC_004063 CR854846.1 misc downstream 24730976 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 28166963 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 28236887 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 28267358 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 28345392 12512966 ~ 12513262 (-)
XLOC_004323 NA non-coding downstream 396167 40460851 ~ 40462487 (-)
XLOC_004319 CT033813.1 non-coding downstream 675858 40182681 ~ 40182796 (-)
XLOC_004313 CR847998.1 non-coding downstream 1213344 39637740 ~ 39645310 (-)
XLOC_004312 NA non-coding downstream 1553491 39303597 ~ 39305163 (-)
XLOC_004338 NA non-coding upstream 422821 41283291 ~ 41316649 (-)
XLOC_004339 CR759952.1 non-coding upstream 514541 41375011 ~ 41375126 (-)

Expression


Co-expression Network