XLOC_000434 (fam193a)


Basic Information

Item Value
gene id XLOC_000434
gene name fam193a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 37312580 ~ 37362246 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000759
TGGAATTTGAAGTCTGCTATACTGTGAGCAGGTCGGCAGGCTCTTAGATTATATCTCTTAAAACAGCTACATTTTAACCGTATCCGCAGCGCCAGAGCCTGGCATTGCACCCGAGACCCCGCGGTTTACTGACGGAACGCTGTCGGTGATTTTCGTGGGCTGGAAATGAGTCCTACAGACGCCAAACGCGGAGCGAAGCGCAGGAAGAATAAGCGGGGCGGCGGCGCAGGGAAGGCCGGAGCTCCGCCAACACCCTCCAGCAGCAGTGCACACGGAGACCCGAGCAACATCCCCAGCCTCAACGGAGAGGTCCCAGTGAATGGCGCTCCTCAGTTTTCAGAAGGCCCAGTGAATGCTGACTTCTCAGGAGTCCTTCAGACCCCATTTACTTTTGGAGTGAACCAGAGGGCCCCGTACACCACCGGTGACCGTTGCCTGCTGTGTCGTAGTGAACGCAAAGACACCATCTCCCAGGACATGGGAGGATCCAGTCAAAATGGCACATCCCAGTCATCCAAATCTTCCAGTTCCCTTCAGTTGCCTCTTTATGTCTGCTCCGACTGCAAACGCACCGTGGAAAAGGACGATCGTCAGCCGCCCCTCGACCAGTCTCTGTTGAATCAGGATTTCTTATTGCACATGCCGATGGGTAATGGCAGTCTGTCCCAGGAGCCGTTAGGGTCCGGAGGGAGACTGGCAGTTGGTGCTCCTACTCTGCCTGCTCCAGATCTCAGCGCTCCTATTACCACAGACACAGTTTGTAGTTGTGAGGCCTGTTATGAGCGGAGGGAGATCACGGCAGAGTCTGAGCGAGAGTCACAACAGCTGCAGAATCACTGGTCTGAGGTCAGATACCTGGTCCGCTGCATTTACCGTCAGACTGGGACTCCACTGGCTGACGATCAGGATCAGCCTCTCGATCGGGACAAAGAGAGCATGAAGGAACTTGTTGACAGGCTTTGTGAGAAGGATCCCTACCAGTTGTACCAGCGTCTAGAACAGCAGGCAAGAGAGTACGTCTTAGAGATGAAGGTGCGGCTGCTCAAACACCTGTCCACAGGCTCAAAGGCTCCTGGTGCAGTGGCTCAAGGGCCCCCACAAGCCCACCAGTTCATCTCACTGCTGCTAGAAGAATACAACGCACTCTGCCAGGCGGCCCGCACCATCAGCAGCTTCCTGCTCACTCTGGAGAATGAGCATTTGCAAAAGTTCCAAGTGACGTGGGAGCTGCACAATAAGCACCTTTTTGAGAACTTGGTGTTCTCTGAACCCATCCTGCACAACAGTCTACCTGCCTTAGTGGCCCAGCTCAGgcaGGGCACAACATCCCACGATTCATACAGTGAGGATATGTACCGTGCATTGCTGGAGAGATATCATCAGCTGGACCAGGAGATGAGCGCAGTGGCTCTTGAATGGCTGGAGTGTGAGAAGAGGATTGACGATTATGTTGATGAACAGTTGCTTTTTAAGGTTGAAGGTCAGAATCTCACAAATCAAAGGACTGAACCACATAAGTCTTTAATTAATAgaaatATGTCTTTAAGAACTAAGCAGCGAATGCTTAAAGAAGATGCAGAGATCTTCAAACataaaagattttttgaagagCAGTTCCAACCAAACAGTAAAAAATCTCTGGGTGGTGACAGCAAGTTCACAGACACAGTGAAACAGATGCTGTCCTCTAGGTTGAGTATTCCAGACTGTCCCAACTGCAACTACAGACGGAGATGTACCTGTGATGACTGCAGCCTGTCTCATATTCTCACCTGTGGCATTATGGATGCTCCAATGGCAGAGGATCTCCATCTGAAGTTGCAGGGCGAGCCGCCGCGGGACTACATGTCAGAGGTCCATCCCCCCAGTATGTCATCAGGCAGCTCGGGGTCTGGCTCGGCCCCAGGCTCCCCCATCACCATCCAGCAGCACCCTCGCCTCATCCTGCCACAGGATGGTACCACTGCATACGATGATGAAGTGCCTCCGTTGTCTGCCATCTACCCTCTAAGCGGGTATGAAGACCCTGCGGTGGTGGCCAGCATTAATGGCATTCACAGCCAGCTCAGTGGAGGAGAGGAGAGCTTGACCCTTAAAGATAAATCTTCACGGGGGAGCAGCAGCAGTAGCAGCTCTTCTGAAGGTGATGAGGAGGAGAGGGAGAGCGGTGGAGAGCCTCCAGGCCAGAAAGAGGTGCTCTCTGGAGGGAAACATGACTGTCCGCCTCCGTCATACCCTCATACACAGGTGGACCACATACAGCATCCATGCGAGTGTCATGTGTGTACTCAGGGCACTGTGGATGGTAGCACCTCCGGCCTGAGCTCCACTTGTCTGCCCTCCAGCAGGCTGCATGCAGGGGGTCACCAATTCTTCTCAGAGAAGACAGCCGCCCACCCTGCCCTCCACCTCTACCCTCACATCCACGGCCATCTCCCCTTACACAACCTCTCGCACCTGCCCAGACCACTGCTGCCCACCCTCTACTCCACCCCTCCACTCACTCACAACAAGACTCTTCCTCCCACTCCCACATCCAGTCACACAGGCGGAAAGCAACAGGCGTTCAATCCAACCTTACCAGAGCACGTGTACCAGAGCTGCTTCAGCACGGCAGGGGACTGGAACGGCTCTTTACCGTGTCCTTCCCTCAAGCTAGAGAACCTCTGGGACACGCACATGATGAAGAACTGGAACCCTTCTGTGCTGCTCCAGGAACCACTGCCTGGTGACATGCTGGGTCCTCCCCTTCCCGACGTGCCCCTACTCTCCTCCAGTTTAGACCCAAGTGTCAACCCCCACCTTTCCCCGGATGGCAAAGAGAAGAAAAATGGCGCCAAGAAAAAGTGTCTCTTCAACTACCAAGATGCCTTTATGGAGGCCAGTGAAGTGGTGATGGCCACTTCCTCTGCCACCTCCTCTGTCTCCAGTACCGCCACCACTGTCCAGTCAAATGAAGTTTTCCATAATTTAGGTAAAGAGGACCATAGACATCCCACTCCTATTGCTCCTAGGAATAGTCCCACCAGCGTTTCATCTCTCCCCCCTCTCAACCCAGCCTCGCACGCTTCTTCCCCAAACACACTACCCAGTATAGTGCCTCCAGGCTTCATGGACGAGCAGCAGGCCAGTGGTGCAAATAGTGTGTGCAGTGATCCAGAGTGTGAGGGTCATCGGTGTGAAGGGAATGGAGGATACGAGCACCAGCCATATGAAGGAGAGGAGAGCCAAGATGAAGACAGCAGCTCGGAGCACAGCTCATCCACCTCCACCTCCACCAATCAGAAGGAAGGAAAGTACTGCGACTGCTGCTACTGTGAATTCTTCGGTCATGGAGGGCCTCCCGCTGCACCAACCAGTAGGAACTATGCAGAGATGCGGGAGAAGTTGCGGCTGAGGTTGACTAAGCGGAAGGAGGAACAACAGCCCAAGAAGGAAGAATTGGTGCTAGAACGGGACGGGGTGGAGGACCATCGCAAGGTAGAAGACCTGCTACAATTCATCAACAGCGCAGACAGCAAACAACAAGGCAGCAGCTCCAAAGCAGCCAAACGTGCCCGTCACAAACAGAAGAAGATGGAAGAAAAAGCTCGTCTAGAGGCAGAAGCTCGGGAACTTGAGGAACAGCAGCAGCTTCTTAAAGAACAGAGGCGGCGACAGCAGGAAGAGGAGGCGGCACTGAAGCAGGAGCTGCTCCATCTGCAGGAAATGCAGCAGTTGCGGGCATctaagaagaaaaagaaagagagtaAAGTCAAGGAGCTGCTCGCCAAGTCTGAAAACCCTTCTCTCGTTCCTACAATCAACAGCCCTCAACCTCTACAGCAGACAGCTCAGAGCGTTTTAGAAAAGAACCTGCAGAACGGCAAAACGCAGCTACTGCACAGCCTCATTCGCCTCAGTCCTAGAGAGCATTGTCTAGAACCCCAATCCCTCATCGGTGGGAAGAACACCTCATCGCAACAGCCATGCCCAAAGACTTGTAAAGAGAGGCCTTCAGAGTGTCCTGCCCTCCAGAACGGCACCTCCTTCTACCCAGAGTCAGCCCACACCAAGGTGAAACCCAAACAGCAAGCAAATGGCTCCAAAACCAACGGGGAAGCCACAAAGAGGCCAGCGGAGACCTCCAAAGCTCCAGAACCTCCCAAAGCTGGGAATGTGGCCAGCCCTCAAACTGACACCAAAGCCAAGCAGAGAACATCAGAGGAGTCTGTGACCGACATCAAGCGGGAAGAGAGGACTAGTGGGAAGAAGCCACAGAATGGAGGGAAAGACGAGAGGAACTCTCCTGTTATTGAACCTCCAGCTTCAGACTCTTCTCAGCAGAATGGCAAAGTCCCAAGCAACGAGTCGCCTCAGCCCAAAAGTAAAGCtaagaagaataagaagaaaaaaGGAGATAAGATGAATAACTCAATAGATGATGTATTTCTGCCCAAAGACATCGATTTGGACAGCGTCGATATGGACGAGACTGAACGCGAGGTGGAATATTTCAAAAGGTTTTGCTTGGACTCGGCGCGACAAACAAGGCAGAGATTGTCCATCAACTGGTCCAATTTTAGCTTGAAGAAGGCCACGTTTGCTGCCCACTAATGGGTCTTCCTTTCAAGAGACAATGGCAGGAATTGATAAGCGTTCCTCTGGTTTCTTCTCGCCCTCTCCCATGTTTCAACAGACTGACTGCTGACCCCCAGTGCTGCTACGCTTCAAACGCTCCTCCGGTCTACATTATCCATGCCGCCTTGCCTTGTCCTTGTTGCTGTGGGTTCCACAAGGAACCAAAACGGGCTTATATTCCTGCAGTACTTCTGGAGAGAAAACAAAAAGAGCAAAGTCGGGGAAAAAAAGAATCAACCACAAAATGCTACTCTATGAGTTTATCCCTATTATTTTGGTTTcccttttcttcttttaaaaagcGTGTGCTTTTTTGTCAGTGAGTGGGCCGTCTCCCTTTGGTCTGTGTGCCATGTTCTGGGTTTTCTCTGGCTTTATGTACATTAGGATGAAGGCACTTCAAAAGACATGCCTAATGAAAAAAAAGACgaatatggagaaaaaaaagagatgcTTTTATTCAAATCAACTGTGGCTTTGCTCACCTTTGCACCTAGCACTGCACTTCCTCACAACCCATTGTCAAGAAAGTCGGACCGGTCAGCCTCTCGTCAATACCCCCTCTACCTCTCCCTTCATTGGGAGAACTGCTAATACTTGACAATGTTCACGTCGGTTTTTCAGTTCCACTTAAAATTGTTCAGTGTAACAACTCCGTTCAAGttataaacttattttatttttgtttttttgtttttttcttttgtttttttttttttccaacttgTACCAAGCTTGTATCAGAAAACTTTCGGAATTGAATCGAAAAGAACAATACTCACACTATCGATCTGTTATAGAGTGTATATTGTATTAACACTGAAGCCAGACTGGCTACTTTTTAACATATTGTTAAGTAATATTAAAATCTTGTCTTTCTTTTTGAAAGATGGAATACAGTAGAGTGGCAGGACAT
>TCONS_00000760
CCTCCCGCTGCACCAACCAGTAGGAACTATGCAGAGATGCGGGAGAAGTTGCGGCTGAGGTTGACTAAGCGGAAGGAGGAACAACAGCCCAAGAAGGAAGAATTGGTGCTAGAACGGGACGGGGTGGAGGACCATCGCAAGGTAGAAGACCTGCTACAATTCATCAACAGCGCAGACAGCAAACAACAAGGCAGCAGCTCCAAAGCAGCCAAACGTGCCCGTCACAAACAGAAGAAGATGGAAGAAAAAGCTCGTCTAGAGGCAGAAGCTCGGGAACTTGAGGAACAGCAGCAGCTTCTTAAAGAACAGAGGCGGCGACAGCAGGAAGAGGAGGCGGCACTGAAGCAGGAGCTGCTCCATCTGCAGGAAATGCAGCAGTTGCGGGCATctaagaagaaaaagaaagagagtaAAGTCAAGGAGCTGCTCGCCAAGTCTGAAAACCCTTCTCTCGTTCCTACAATCAACAGCCCTCAACCTCTACAGCAGACAGCTCAGAGCGTTTTAGAAAAGAACCTGCAGAACGGCAAAACGCAGCTACTGCACAGCCTCATTCGCCTCAGTCCTAGAGAGCATTGTCTAGAACCCCAATCCCTCATCGGTGGGAAGAACACCTCATCGCAACAGCCATGCCCAAAGACTTGTAAAGAGAGGCCTTCAGAGTGTCCTGCCCTCCAGAACGGCACCTCCTTCTACCCAGAGTCAGCCCACACCAAGGTGAAACCCAAACAGCAAGCAAATGGCTCCAAAACCAACGGGGAAGCCACAAAGAGGCCAGCGGAGACCTCCAAAGCTCCAGAACCTCCCAAAGCTGGGAATGTGGCCAGCCCTCAAACTGACACCAAAGCCAAGCAGAGAACATCAGAGGAGTCTGTGACCGACATCAAGCGGGAAGAGAGGACTAGTGGGAAGAAGCCACAGAATGGAGGGAAAGACGAGAGGAACTCTCCTGTTATTGAACCTCCAGCTTCAGACTCTTCTCAGCAGAATGGCAAAGTCCCAAGCAACGAGTCGCCTCAGCCCAAAAGTAAAGCtaagaagaataagaagaaaaaaGGAGATAAGATGAATAACTCAATAGATGATGTATTTCTGCCCAAAGACATCGATTTGGACAGCGTCGATATGGACGAGACTGAACGCGAGGTGGAATATTTCAAAAGGTTTTGCTTGGACTCGGCGCGACAAACAAGGCAGAGATTGTCCATCAACTGGTCCAATTTTAGCTTGAAGAAGGCCACGTTTGCTGCCCACTAATGGGTCTTCCTTTCAAGAGACAATGGCAGGAATTGATAAGCGTTCCTCTGGTTTCTTCTCGCCCTCTCCCATGTTTCAACAGACTGACTGCTGACCCCCAGTGCTGCTACGCTTCAAACGCTCCTCCGGTCTACATTATCCATGCCGCCTTGCCTTGTCCTTGTTGCTGTGGGTTCCACAAGGAACCAAAACGGGCTTATATTCCTGCAGTACTTCTGGAGAGAAAACAAAAAGAGCAAAGTCGGGGAAAAAAAGAATCAACCACAAAATGCTACTCTATGAGTTTATCCCTATTATTTTGGTTTcccttttcttcttttaaaaagcGTGTGCTTTTTTGTCAGTGAGTGGGCCGTCTCCCTTTGGTCTGTGTGCCATGTTCTGGGTTTTCTCTGGCTTTATGTACATTAGGATGAAGGCACTTCAAAAGACATGCCTAATGAAAAAAAAGACgaatatggagaaaaaaaagagatgcTTTTATTCAAATCAACTGTGGCTTTGCTCACCTTTGCACCTAGCACTGCACTTCCTCACAACCCATTGTCAAGAAAGTCGGACCGGTCAGCCTCTCGTCAATACCCCCTCTACCTCTCCCTTCATTGGGAGAACTGCTAATACTTGACAATGTTCACGTCGGTTTTTCAGTTCCACTTAAAATTGTTCAGTGTAACAACTCCGTTCAAGttataaacttattttatttttgtttttttgtttttttcttttgtttttttttttttccaacttgTACCAAGCTTGTATCAGAAAACTTTCGGAATTGAATCGAAAAGAACAATACTCACA

Function

symbol description
fam193a Orthologous to human FAM193A (family with sequence similarity 193 member A).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005575 cellular_component cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-080917-25 Orthologous to human FAM193A (family with sequence similarity 193 member A).

Ensembl:

ensembl_id ENSDARG00000102787

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000759 False 5536 mRNA 0.51 23 37312580 37362246
TCONS_00000760 True 2064 mRNA 0.47 4 37355487 37362113

Neighbor

gene id symbol gene type direction distance location
XLOC_000433 dclk2a coding upstream 2090 37195465 ~ 37310490 (+)
XLOC_000432 FO704615.1 coding upstream 188808 37123642 ~ 37123772 (+)
XLOC_000431 NA coding upstream 346298 36966000 ~ 36966282 (+)
XLOC_000430 arhgap10 coding upstream 399489 36771954 ~ 36913091 (+)
XLOC_000429 tmem184c coding upstream 566011 36722122 ~ 36746569 (+)
XLOC_000435 sparcl1 coding downstream 28895 37391141 ~ 37419873 (+)
XLOC_000436 NA coding downstream 229012 37591258 ~ 37638367 (+)
XLOC_000437 si:dkey-6f10.4 coding downstream 339015 37701261 ~ 37704183 (+)
XLOC_000438 GALNTL6 coding downstream 389925 37752171 ~ 38132612 (+)
XLOC_000439 NA coding downstream 471101 37833347 ~ 37834392 (+)
XLOC_000425 BX324156.1 non-coding upstream 1158203 36154261 ~ 36154377 (+)
XLOC_000421 NA non-coding upstream 1414143 35896392 ~ 35898437 (+)
XLOC_000415 NA non-coding upstream 2219068 35034294 ~ 35093512 (+)
XLOC_000440 CT583668.1 non-coding downstream 634213 37996459 ~ 37996577 (+)
XLOC_000442 NA non-coding downstream 809611 38171857 ~ 38324035 (+)
XLOC_000443 NA non-coding downstream 821553 38183799 ~ 38187194 (+)

Expression


Co-expression Network