XLOC_004356



Basic Information


Item Value
gene id XLOC_004356
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 42151444 ~ 42152573 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00008494
CTACTATGTTAAACAATacaaatctgttaaacatcacttgggaaatattggtaaataaataaaaatatttggaggagggctaataattttatctcaactgtatatattttttcataataaagATACTTTTAACAATGATCTGAttataaacactcaccggccactttattaggtacatctgtccaactgctcgttaacgcaaatttctaatcagccaatcacatggcagcaactcaatgcttttaggtatgtagacaagacgatctgctgcagttcaaattagcatcagaatggggaagaaaggtgatttaagggactttgaacatggcatggttgctggtgctatacgagctggtctgagtgagaatttcagaaacttctgatctactaggattttcacgcacagccatctctagggtttacagaaaa

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00008494 True 429 lncRNA 0.36 2 42151444 42152573

Neighbor


gene id symbol gene type direction distance location
XLOC_004354 FP325130.1 coding downstream 16476 42128552 ~ 42134968 (-)
XLOC_004352 NA coding downstream 26162 42113072 ~ 42125282 (-)
XLOC_004353 NA coding downstream 27173 42121855 ~ 42124271 (-)
XLOC_004351 si:ch211-193l2.10 coding downstream 45134 42101661 ~ 42106310 (-)
XLOC_004350 abhd6a coding downstream 51799 42062067 ~ 42099645 (-)
XLOC_004357 slmapa coding upstream 152012 42304585 ~ 42418374 (-)
XLOC_004358 arf4b coding upstream 314261 42466834 ~ 42472941 (-)
XLOC_004359 pde12 coding upstream 353479 42506052 ~ 42525450 (-)
XLOC_004360 atp6ap1la coding upstream 379891 42532464 ~ 42554290 (-)
XLOC_004361 si:ch73-106k19.2 coding upstream 567630 42720203 ~ 42730063 (-)
XLOC_004063 CR854846.1 misc downstream 26023766 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 29459753 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 29529677 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 29560148 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 29638182 12512966 ~ 12513262 (-)
XLOC_004349 NA non-coding downstream 107163 42042562 ~ 42044281 (-)
XLOC_004347 NA non-coding downstream 124846 42004163 ~ 42026598 (-)
XLOC_004348 NA non-coding downstream 131579 42016754 ~ 42019865 (-)
XLOC_004363 NA non-coding upstream 589961 42742534 ~ 42745180 (-)
XLOC_004365 NA non-coding upstream 656941 42809514 ~ 42817704 (-)
XLOC_004368 NA non-coding upstream 909309 43061882 ~ 43062986 (-)
XLOC_004371 NA non-coding upstream 1048962 43201535 ~ 43204207 (-)
XLOC_004372 FO834831.1 non-coding upstream 1075839 43228412 ~ 43230364 (-)

Expression



Co-expression Network