LOC118954944 (LOC106591641)


Basic Information

Item Value
gene id LOC118954944
gene name LOC106591641
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493846.1
NCBI id JAAXML020000543.1
chromosome length 111414
location 7700 ~ 20449 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036974077.1
TGTAGTTCCTACTAAAAACATTGCTCGACGAAGCAAGAGGTGTCGAGttaaaaatgtaacatttgtTTAATGTTCTAGCTAGTCTTAACGTGCCTGTCGTTTGAAAATTAAATCAACAACCCTAGTAGGTCACGTTTCAATATCCATCAATAGTACTTGGAAAATGTTACCAAAACTTGCATACATGtgttttagctagctaaccagaTTATCACTAAAATAGCTAACAAGCTAATGTTGTTAGCCACGGTCCGTCCCACTTGCAGCACAACGGTATCCTATGCTTTACACTGTTTCAAAATGACCTCGCCTTATTTCGTTGAGAGTACCGCGGTCATCACTCGGAGCGGTAACAAGACCGTGCCCCGTGCCGGTTTAGCCACGACGTTAAAAActaggatggagaggagagtgtTGAGGGCGCACGTGAAACAGGAGGAAGAAGATTCGAGAGTATCAAATCAGAGTTTGGGACGAGACGCTTCAGATATTGGCTCCTCTAGGTTCCGTCGCTCATCCATTGGCCAATCACAAGCTGAGCCAGACAAAGCCCTGTCCCTGTTACCACTGGCACCCATCCTGCGTAGGAGGCGGGGCCAGGTGAAGGTGGAATACGATGGGAAGGAGGAGCCTAAACACTGGGAGCCTCCTGATTGGAGCAAGCAGCTGGGTCATGTGCGTCAGATGAGGAGCGCCAGGAACGCGCCTGTTGACCTCATGGGGGCGGAGAAATGCTACGACACACACGCCCCTGATGAGGTGCGACGTTACCAGGTGCTGGTGTCTCTGATGTTGTCAAGCCAGACAAGGGACCAGGTGACCAGTGCGGCTCTGCAGAGACTCAGGGCTCATGGCTGTACAGTGGACAACATAGTCAACACTGACGATGACACACTGGGACAACTCATCTACCCTGTCGGCTTCTGGAAGACCAAGGTGAAGTACCTGAAGCAGACGTCAGTGATGCTCCAGAGGGAGTTTAGAGGGGACATCCCGAACACAGTGGAGGGCCTGGTACGACTACCTGGAGTAGGACCCAAGATGGCTCACCTGGCCATGGACATCGCCTGGCACCAGGCGTGGACACACACGTCCACCGTATCTCCAACCGGCTGGGATGGACGAGAGGTGGGACCAAGAAGCCAGAGGAGACACGCAAGGCCCTGGAAGACTGGTTACCAAGGGATCTATGGAGTGAGATCAACTGGTTGCTGGTGGGGTTTGGTCAACAGGTGTGTCTACCTGTCAATCCTCTCTGCTCCGTGTGTCTGAACCAGCACAGCTGCCCCTCTGCCCACCAAGCCTCCCCAGCCAAGAGGCCTAAAGCTGGGTCACCTCGCTCACCACACTCCCCCAAGACCTCTAGGGTCAAGCTGGAGCCTGGTTCTCTTGGTTTGGGGTTACCACCCCCCTCCTCAGCCACACCGGTCAAAGAGGAACCTCTGGCTACCACCTTCTCCCCTCTGCTGCCCAGAAAGAGGAAGTCGAAAGCCAAAACCTTCTCTACATGATACGACAGAAGAGGGTAGCATCCCTTCAGAAATGTCAGGACCGTGTCCcaattctctctccttcctcccaaagtTTGCTCTTGTCACTTCCCT
>XM_036974076.1
TGTAGTTCCTACTAAAAACATTGCTCGACGAAGCAAGAGGTGTCGAGttaaaaatgtaacatttgtTTAATGTTCTAGCTAGTCTTAACGTGCCTGTCGTTTGAAAATTAAATCAACAACCCTAGTAGGTCACGTTTCAATATCCATCAATAGTACTTGGAAAATGTTACCAAAACTTGCATACATGtgttttagctagctaaccagaTTATCACTAAAATAGCTAACAAGCTAATGTTGTTAGCCACGGTCCGTCCCACTTGCAGCACAACGGTATCCTATGCTTTACACTGTTTCAAAATGACCTCGCCTTATTTCGTTGAGAGTACCGCGGTCATCACTCGGAGCGGTAACAAGACCGTGCCCCGTGCCGGTTTAGCCACGACGTTAAAAActaggatggagaggagagtgtTGAGGGCGCACGTGAAACAGGAGGAAGAAGATTCGAGAGTATCAAATCAGAGTTTGGGACGAGACGCTTCAGATATTGGCTCCTCTAGGTTCCGTCGCTCATCCATTGGCCAATCACAAGCTGAGCCAGACAAAGCCCTGTCCCTGTTACCACTGGCACCCATCCTGCGTAGGAGGCGGGGCCAGGTGAAGGTGGAATACGATGGGAAGGAGGAGCCTAAACACTGGGAGCCTCCTGATTGGAGCAAGCAGCTGGGTCATGTGCGTCAGATGAGGAGCGCCAGGAACGCGCCTGTTGACCTCATGGGGGCGGAGAAATGCTACGACACACACGCCCCTGATGAGGTGCGACGTTACCAGGTGCTGGTGTCTCTGATGTTGTCAAGCCAGACAAGGGACCAGGTGACCAGTGCGGCTCTGCAGAGACTCAGGGCTCATGGCTGTACAGTGGACAACATAGTCAACACTGACGATGACACACTGGGACAACTCATCTACCCTGTCGGCTTCTGGAAGACCAAGGTGAAGTACCTGAAGCAGACGTCAGTGATGCTCCAGAGGGAGTTTAGAGGGGACATCCCGAACACAGTGGAGGGCCTGGTACGACTACCTGGAGTAGGACCCAAGATGGCTCACCTGGCCATGGACATCGCCTGGCACCAGGTCTCTGGCATAGGCGTGGACACACACGTCCACCGTATCTCCAACCGGCTGGGATGGACGAGAGGTGGGACCAAGAAGCCAGAGGAGACACGCAAGGCCCTGGAAGACTGGTTACCAAGGGATCTATGGAGTGAGATCAACTGGTTGCTGGTGGGGTTTGGTCAACAGGTGTGTCTACCTGTCAATCCTCTCTGCTCCGTGTGTCTGAACCAGCACAGCTGCCCCTCTGCCCACCAAGCCTCCCCAGCCAAGAGGCCTAAAGCTGGGTCACCTCGCTCACCACACTCCCCCAAGACCTCTAGGGTCAAGCTGGAGCCTGGTTCTCTTGGTTTGGGGTTACCACCCCCCTCCTCAGCCACACCGGTCAAAGAGGAACCTCTGGCTACCACCTTCTCCCCTCTGCTGCCCAGAAAGAGGAAGTCGAAAGCCAAAACCTTCTCTACATGATACGACAGAAGAGGGTAGCATCCCTTCAGAAATGTCAGGACCGTGTCCcaattctctctccttcctcccaaagtTTGCTCTTGTCACTTCCCTTGACTGATGTGAAATGACCAGTACTAGAGATAGGGTGGTAACTCCTACTAGCCCAGTGGTATTAACTGCTTTAGCGGGGAGACCATTTTTAGACTGAATTTCGGTGAACTCATTTATTTCTCACAACACTCAAACTAAACCTTCAAAtctttacatttagatttttactTACACTAATAAATAAATTCTCAATAAAATATTTTTCAAATTATCTCAAA

Function

NR:

description
endonuclease III-like protein 1 isoform X2

GO: NA

KEGG:

id description
K10773 NTH; endonuclease III

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036974077.1 False 1604 mRNA 0.53 6 7700 20231
XM_036974076.1 True 1835 mRNA 0.50 6 7700 20449

Neighbor

gene id symbol gene type direction distance location
LOC110519327 LOC106592281 coding downstream 48411 68860 ~ 74182 (+)
G2369915 NA non-coding downstream 37713 58162 ~ 58841 (+)
G2369922 NA other downstream 56199 76648 ~ 77511 (+)

Expression


Co-expression Network