Fish Transcriptome and Expression Database

LOC110519327 (LOC106592281)

Basic Information

Item	Value
gene id	LOC110519327
gene name	LOC106592281
gene type	coding
species	rainbow trout (Oncorhynchus mykiss)
category of species	economic fish

Chromosome Information

Item	Value
chromosome id	NW_023493846.1
NCBI id	JAAXML020000543.1
chromosome length	111414
location	68860 ~ 74182 (+)
genome version	USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036974078.1
ggtcttcactctcAAAGCTGCCATCAGAATACTCTTGAGTTACGTTCCACCACTACTGAACCAAATTAGAACTTAGATTTTAAATTACAATGTCAAACCTTTTCTGTCAttgtgtttcctctctctctctgtctctctatctgtagtTGCCATCGGAGACAGCGTCGTTAGATACAGAGTTTCCCATGGCGACGGTGGAGCTCCTCCACCGGCTGTGTCACATGGTGAAGGGGGAGCTGGGATACGGGTTCAACCTGCACAGTGACAGAACACGGCGAGGACAGTTCATACGCAGCGTGGATCCCGGGTCCCCCGCCCAACACGCAGACCTCAGATCCCGGGACAGGCTGGTGGAGgtgAATGGAGTGAACATCGAGGCGTTGAGACACTCAGAGGTGGTGGCGTTTATACGTGGCGGGGGGGACGAGACACGCCTCCTGGTGGTCGACGCGGAAACAGACGAGCTGTTCAAGAGGCTCGGGGTCACGCCCACCAGCACACATGTCAGAGAGGTCTATGTGGACGAGCCAATGACAGACAGCGCCCCACCCACCCCCTCTTCAACCACTGACCTCACTCCAATGGATCCACCAATCATCAACGTCACCCTGATGGGCTCACCAATCACCAACGGCTCGCCCAATTCACAGACCAATTCCCAGTACTCACGTGGCTCGACTACCCAATCAGAATTCAGCAGCTCAGATATGAGCattcaggtccctGAGGATTATGAGCGCCGTGTTTCAGACCCGTTCCTGGACAGCGGACTGCATCTGAGCCCCACGGCAGCCGAGGCCAAAGAGAGGGCCCAACACGGCAAGAAGAGAGCGCCCCCTATGGACTGGAGCAAGAAGCAGGAGATCTTCAGCAACTTCTGAGAaccacacagaaccacacagaaCCTTCACAACAATGTTCTTAAGTCCCTCAAGGTTGATAAAGGTCTGGCACAGGGACACACCATAACCAATGTTGGCCGTGCGCAGTAGATCATCAGCCCGGAGACAATTTCATCGTGGGAAATTAATAGCAAATGGCAGCCAATGTTTTGTGGTGAGAGGCGATAGGAGGACCTCACGCTGCGCACGGCTGACGTTCGTTATGGTGTGTCATGTGACAGAGCTTCACCAGCCAATGTTCTGAGGTGAGAGGTGATAGGAGGACCTCCCGCTGCTGCTCGGCTGCTCGTTATGGTGCGTCATGTGACAGAGCTTCAACAGCCAATCAAGATAAAAGGCTGCAGTGGCTCCGAAACAACTCTGAGAAAAACACAGAAAGCCTCTGTCCCCGGCAGGATCTGAACCCTGGTCTCCCACGGGACAAACCAACATCTTAACCATTAGACAAAGAGGAAATTCCCTGTGTGTCTGAGGGCCAACACTTATTGTGAAGTCACACGCGGGGCTCCCTCATCACGTGACCATGAGCAGCCATGACCGTCCCATATCTGCTACACctccatataccactactatggATTATTACAGTACCTTAGGATGAGGATAAATCATGTTGAAGTATTTAGCCAGGATAATTGACTCAGTTCCACTTGTTTCCATGGCTCTTGTTTCCATGGCTCTAGTTTCCATGGCTCTTGTTTCCATGGCTCCTAAACGTTTCTCAGAGCTGTGATTTCACTGAAAGTTTTTTTTTCCTTCTACAGCAACTAGTAAGAAACATTCACTGGCCCAACCACCACACACCGAACCCCACCCCACCTCTTCACCCTCCACAGAAAAACAGGGTGGATTGTTTCCCAAAAGACTGAGAggtgggcccgtatccacaaagtgtctcaaagtaggagtactgatctaggatcagtttagagttttttttttatgtcataaTGAATACAATAAATTGTATAGGGAAGGATCTGATCCTAGTTTTATTAGATCTGAGGTAAGAACGTCAGGACACCACAACATCCGGGCCGGCTTACAGATGTGACCCCTGTGGCCGAGTCTTCCTCTCACGGACCGGACTTCACGGTCACAGCAGATGCTGCGCTAAGATCTAACTCCAAGGCACAataaagaaccctttttggttccagatagaacctcTTGTTCCAAATAGAACTCTTGAAAGGCTGCTGTTTGGAACCTAAAGGGGTTATCGTCTGACCTGACCTGGTTCTTACCTGGAACCTTTTCCAGAGGGTTCAACAGGGACAAATGGTTCTACATAGCCCTTTTGAGAGTATAGAAGCGAGCTTCTCAGATGTATAAATGAGGTACGTAGGAACCACATCACGTCATAGACACGGACGTCTGAATGATGGACAGACTGAGGGGATGAATCCTCTGACCGTGAGATGAAGAGACGCTGAGAAACAGAGACAAACACTCAAATTAGTGTGATGGGCGTCAcagaggtagagaaggaaagtCCAGGATCTCAATGGATTTTCAGATGAAGAGATACGAGTTACTGAAGTCCTTTGTAATGAGGGAAGAGGAGACACATTGGGAATTGGGTGCATTACATTGGGTTGACTGAACTCTACAGCATAAATGTTGCctagactgcagagagagacttGTGTCAATGTGTAGGCCAACAAATGCCTGAACGGTTCGCCATTAAGATAAAACCACTATTTATGTGATTATGACTGATTTATATTATTCTGTGATATTATTAGCAATTTGTTTACAAACTGTGTTCTTCTAGTATTTAAATATTTGGTTTTTATTCTGTCACAATTTCCGGTTGGAAAGTAAGACACACCCAGCCAGCTTTGTCTGTCTCTGCTGTCCAGAACAGAACTCTGAGTTGAAGGAAGAAATGGGAGGAGCCGGGTTAAGCTCTAGATTTGTTTATATTTTGTGTAATTATATTATTGTTTGTGGTTGAATCCCACTTTCGTTGTCCTCAAACATTCATCACTTTTTAGAGGAATTCATAAATGGACCCATTTTAGTTCGTTTGACTAGTTTGGTTACGAAGCTAAGCTAGTTTCAGTGCAGACCGATGTCTCAGTGCCGGGATTCAATCAGATCAGCGCTAGATCTGCATTGTAGCACGGatgacatttaaaggtaattgACAATGGAGCCGACATGTGCAGAATTTGCCGTGAATGCGGTCTTCTGCGATCGCGGGAACTTTCCCTTTAAAAGGTGAATAGTGAATCCCGGCCTTACTTTTAATGTGATCATCTCTCCAGTTGTAAATTTGTATCTAATGTAACAAAGTTACATTTAATTTGATCATCTCTCCAGTTGTAGATTTGTATCTATTGTAACTAAGTTACTTTTAATGTGATCATCTCTCCACTTGTAGATTTGTATCTAATGTAACTAAGTTACTTTTAATGTGATCATCTCTCCAGTTGTAGATTTGTATCTAATGTAACTAAGTTACTTTTAATGTGATCATCTCTCCAGTTGTAAATTTGTATCTAATGTAACTAAGTTACTTTTAATGTGATCATCTCTCCAGTTGTAAATTTGTATCTAATGTAACTAAGTTACTTTTAATGTGATCATCTCTCCAGTTGTAAATTTGTATCTAATGTAACTAAGTTACTTTTAATTTGATCATCTCTCCAGTTGTAGATTTGTATCTAATGTAACTAAGTTACTTTTAATTTGATCATCTCTCCAGTTGTAGATTTGTATCTAATGTAACTAAGTTACTTTTAATTTGATCATCTCTCCAGTTGTAGATTTGTATCTAATGTAACTAAGTTACATTTAATTTGATAATCTCTCCAGTTGTAAATATGAATCTACTGTAACCAAGGCTATTATATGAACACAAAGTGGACTGGACATTAATATGAAAtaaaatgacaaaataaatgtttaacaCTGTCGTTCTGTATTGCTGTAGATGAGCAGTGGTATGGTTTCTCTTTTGTTGCACCATCTCTTCACAATCAATATGATCTAGAATAATTCTTAAATGTGTTTTGAGGGGACAT

Function

NR:

description
Na(+)/H(+) exchange regulatory cofactor NHE-RF2-like

GO: NA

KEGG: NA

RNA

RNA id	representative	length	rna type	GC content	exon number	start site	end site
XM_036974078.1	True	3937	mRNA	0.44	4	68860	74182

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
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Neighbor

gene id	symbol	gene type	direction	distance	location
LOC118954944	LOC106591641	coding	upstream	48411	7700 ~ 20449 (+)
G2369915	NA	non-coding	upstream	10019	58162 ~ 58841 (+)
G2369922	NA	other	downstream	2466	76648 ~ 77511 (+)

gene	XLOC_000007 f7
RNA	TCONS_00000019
bioproject	PRJEB12982

economic fish

Basic

Function

RNA

Neighbor

Expression

WGCNA

LOC110519327 (LOC106592281)

Basic Information

Chromosome Information

Sequence

Function

NR:

GO: NA

KEGG: NA

RNA

Neighbor

Expression

Co-expression Network

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