XLOC_004363



Basic Information


Item Value
gene id XLOC_004363
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 42742534 ~ 42745180 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00008496
GTCTGCCACCAGATCTCTCTCAATCAAACAGCAGCTCAACAAAGTCTCATTGAGGGTTTCAAACGTGTGGCAGAAAACCAACATACAGCACACATCTTAGACCATAAAAATGGCTAAAGCTTATGTAGAAGCGGGAGTTGGACAAGTTGGAACTGAATTTTCAGTTGGTGCAGAAGCCAAAGGTCCGAATGCCTCAGCTGGTATTGGAATTGATGCGGATGGAGGAGCAGAAGCAATGGCTCGAGCTGAAATTGGCAGTGCATCAGTTCATGCTGGTCCAGTCGGTGTGAAAGTGGGACTCGGAGTCGACACCGGTGCATCTGTTGGTCCAAACGGGCTGGAGGTCAAAGTCCTGGGAACTGGAGTCACGCTTGGTCCGAATCCCAGTATTGCTCTTCTGGGTTCAGAAGTGTCATGTTCAGTCATGTAGACATGCAGgtgtGTTGCATTAGATGGCACCATTGACAgtttggatccaacttttgtgaAGATTTTAAGTGacacctaattaaccaagttaagtctttaaatttcactttaagctgaatactagtatcctgtgaattaactagtaaaatataatgcaaTGTCACCATCACAACAACAAGACATTAGTTattaaagggctcctattttaccccctttAAAACATCTTACATAAGTCttctgtgtctccagaatgtgtctgtaaagtttcagctaaaaataccaTTTTACCACTTATACCCTCCTGAATATTCACATTTTATGCTCAGAtgacagtgtagctgtttttgttgcctgtgtgCAATGCAACGACGCATTATTTTCTACACACACGTTTACACTGTTTGCACATCTACTTGAAGCATCCTCGTATAGCCTCTATGCGGCTGTGGTGCTTCAATAATCCGTTATGAATTACATTGATTTTACAGTCTTTTCTATATTACAAACATCCACTGTTTTAAAACCGTTTGAAACTCATTCTTGGGGTactgctgatcacagagagtctgagcagatcttttaatcccttTTTCCCATTTT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00008496 True 1029 lncRNA 0.41 3 42742534 42745180

Neighbor


gene id symbol gene type direction distance location
XLOC_004362 CU459094.2 coding downstream 3386 42731890 ~ 42739148 (-)
XLOC_004361 si:ch73-106k19.2 coding downstream 12471 42720203 ~ 42730063 (-)
XLOC_004360 atp6ap1la coding downstream 188244 42532464 ~ 42554290 (-)
XLOC_004359 pde12 coding downstream 217084 42506052 ~ 42525450 (-)
XLOC_004358 arf4b coding downstream 269593 42466834 ~ 42472941 (-)
XLOC_004364 si:ch73-106k19.5 coding upstream 1189 42746369 ~ 42761293 (-)
XLOC_004365 NA coding upstream 64334 42809514 ~ 42817704 (-)
XLOC_004366 pcdh20 coding upstream 165724 42910904 ~ 42918971 (-)
XLOC_004367 EML6 coding upstream 184367 42929547 ~ 43002262 (-)
XLOC_004368 NA coding upstream 316702 43061882 ~ 43062986 (-)
XLOC_004063 CR854846.1 misc downstream 26614856 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 30050843 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 30120767 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 30151238 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 30229272 12512966 ~ 12513262 (-)
XLOC_004356 NA non-coding downstream 589961 42151444 ~ 42152573 (-)
XLOC_004352 NA non-coding downstream 617252 42113072 ~ 42125282 (-)
XLOC_004353 NA non-coding downstream 618263 42121855 ~ 42124271 (-)
XLOC_004349 NA non-coding downstream 698253 42042562 ~ 42044281 (-)
XLOC_004348 NA non-coding downstream 722669 42016754 ~ 42019865 (-)
XLOC_004371 NA non-coding upstream 456355 43201535 ~ 43204207 (-)
XLOC_004372 FO834831.1 non-coding upstream 483232 43228412 ~ 43230364 (-)
XLOC_004373 NA non-coding upstream 710289 43455469 ~ 43457258 (-)
XLOC_004347 NA non-coding downstream 715936 42004163 ~ 42026598 (-)

Expression



Co-expression Network