XLOC_004371


Basic Information

Item Value
gene id XLOC_004371
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 43201535 ~ 43204207 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00008871
AGTGTATAGTGCAGTTGTGTAGTGTATAGTGTGTATTGTGTCCTCTAAGGGTCAGTGAGGGTCATCTCTGTGCTCCAGCggctttagatgtgtgtgtgtgtttgtccaccTATAGTGCAGTAGTGTAGTGTATAGTGTGTATTGTGTCCTCTGTGGGTCAGTGAGGGTCATCTCTGAGCTCCAGCGGctgtagatgtgtgtgtttttgtccaCATGTAGTGCAGTAGTGTAGTGTGTAGTGTATAGTGTGTATTGTGTCCTCTGCGGGTCAGTGAGGGTCATCTCTGAGCTCCAGCAGctgtagatgtgtgtgttttgtcctcTGGCAGATGTTCTTCTTCCTCTGTTTGTTGTGTTTGGGGTCAGTGTGTGTCACTCCACCTCTGCCTCTATTCTCTGGATCTCGCTCTTCCAGACGGTCATCCTGGAAAACGTCTGGTGTCCGCAGACGCTGGAGAACAATTGAAGCAGACACTTGCGTCTGTGCCCGTCAGGAATGCAATAACAGGAAAATTGGGAGGATTATAAATAAATGCTCGTATTTTGAACTGTTGACCCCTGCTgacatgcataaataaacaaggcCGCCGCCCCCTTTGCATTGTTTCCCAATGTTTGATTGGTTAGTCCGTGCATGAGTTATGGGAGAGATTTTGGAAATGGGCTAAAGGAGTAAAAAAGGTTTGGTATGCGAGGGAAGGAGTTTCAGGTTGCGACatgggtgaatgtgtggcttcaTGGagaagtttttaaaacatttgattctTCATCCAAGAGCAATGATTGGAGTTGAGGAATGTTTCTGGGGGAAATGTTGCAATGATTGCGGACCATTACAACGGCCTCCTTTCGTCCTGCAAGATCTAGTTCATACCAGTCTAAATTTAGCATGTGTAAAATGCAGGATTCTGTGGTAAAGTCTAtttctcagcagcagaaaacAATACGGAAATATCTGATGATTTTGTGTATTGTGGTAACAGGAAATAGAGTCCCGtttatatag

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00008871 True 1006 lncRNA 0.45 3 43201535 43204207

Neighbor

gene id symbol gene type direction distance location
XLOC_004369 acyp2 coding downstream 97060 43102421 ~ 43104475 (-)
XLOC_004368 NA coding downstream 138549 43061882 ~ 43062986 (-)
XLOC_004367 EML6 coding downstream 199273 42929547 ~ 43002262 (-)
XLOC_004366 pcdh20 coding downstream 282564 42910904 ~ 42918971 (-)
XLOC_004365 NA coding downstream 383831 42809514 ~ 42817704 (-)
XLOC_004372 FO834831.1 coding upstream 24205 43228412 ~ 43230364 (-)
XLOC_004373 NA coding upstream 251262 43455469 ~ 43457258 (-)
XLOC_004374 NA coding upstream 257188 43461395 ~ 43466520 (-)
XLOC_004375 tmem63bb coding upstream 265969 43470176 ~ 43473824 (-)
XLOC_004376 NA coding upstream 509503 43713710 ~ 43716304 (-)
XLOC_004063 CR854846.1 misc downstream 27073857 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 30509844 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 30579768 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 30610239 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 30688273 12512966 ~ 12513262 (-)
XLOC_004363 NA non-coding downstream 456355 42742534 ~ 42745180 (-)
XLOC_004356 NA non-coding downstream 1048962 42151444 ~ 42152573 (-)
XLOC_004353 NA non-coding downstream 1077264 42121855 ~ 42124271 (-)
XLOC_004380 FO704721.3 non-coding upstream 896132 44100339 ~ 44120354 (-)
XLOC_004352 NA non-coding downstream 1076253 42113072 ~ 42125282 (-)

Expression


Co-expression Network