trnar-ccu-182


Basic Information

Item Value
gene id trnar-ccu-182
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493884.1
NCBI id JAAXML020000396.1
chromosome length 98619
location 89997 ~ 90069 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnar-ccu-182
gccccagtggcctaatggataaggcactggcctcctaagccagggattgtgggttcaagtcccatctggggtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnar-ccu-182 True 73 mRNA 0.59 1 89997 90069
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Neighbor

gene id symbol gene type direction distance location
trnar-ccu-181 NA coding downstream 60758 29167 ~ 29239 (-)
trnar-ccu-180 NA coding downstream 64573 25352 ~ 25424 (-)
trnar-ccu-179 NA coding downstream 66733 23192 ~ 23264 (-)
trnar-ccu-178 NA coding downstream 72438 17487 ~ 17559 (-)
trnar-ccu-177 NA coding downstream 82764 7157 ~ 7233 (-)
trnar-ccu-183 NA coding upstream 1027 91096 ~ 91172 (-)
trnar-ccu-184 NA coding upstream 2129 92198 ~ 92270 (-)
trnar-ccu-185 NA coding upstream 3507 93576 ~ 93648 (-)
trnar-ccu-186 NA coding upstream 6773 96842 ~ 96918 (-)
G2370970 NA non-coding downstream 38953 45275 ~ 51044 (-)
G2370957 NA non-coding downstream 46914 24277 ~ 43083 (-)

Expression

trnar-ccu-182 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: -0.5 to 0.5.
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Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) trnar-ccu_12 NA coding NC_053132.1 CM020929.1 25097875 ~ 25097947 (-)
striped catfish (Pangasianodon hypophthalmus) trnar-ccu_16 NA coding NC_047611.1 CM018557.1 18463039 ~ 18463111 (+)
tiger barb (Puntius tetrazona) trnaa-cgc_28 NA coding NC_056704.1 CM032073.1 13452748 ~ 13452819 (-)
mexican tetra (Astyanax mexicanus) trnar-ccu_16 NA misc NC_035900.1 CM008303.1 23748999 ~ 23749071 (+)