XLOC_004418 (mrpl58)


Basic Information

Item Value
gene id XLOC_004418
gene name mrpl58
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 47439 ~ 49920 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00008884
CGCAGATCACGTGAGGCATCTCCGTCCAACATGGCGGCGCCCGCAGTGTGCAGTTTCTCCCCGCTGGTGTGTGCGTGCCGGTGGAGATTAACGGGAATAACGGCGCTCAGCAGCGGCACCGCGGGAATCCAGCACCGGCCCGGGATCGGTTTCTGCCCCGCCAGAGCCGCGGCGCGGAGCACACAGGACCAGCAGCTCACACACATCCCTGTAGATAAACTGAAGGTCTCCTACAGCCGCAGCAGTGGAGCAGGCGGTCAGCACGTCAACAAAGTCAACACAAAAGCAGAGGTGCGTTTCCACGTGCAGACGGCGGACTGGCTTCCAGAGACCCTGAAGAGCCAGATTCTGCTGAAGCACCAGTCGCGCATTAACAAAGCCGGAGAGCTGTTTGTGCGCTCAGAGATCAGCCGCAGCCAGCGGAGGAACCTGCAGGAGTGTGTGCAGAAGCTCACAGCGCTGATCCAGGAGGCGGAGCAGCAGGAGGCGGAGCCAAGCCCGGAGGACCAGGAGCTGTGGAAGAAcagGTTAAATAAGAGGAATCTGGAAAGACTCAAGCAGAAGAAGATCCACTCTGCTACTAAGCGAGCGAGGCGACCAGACTTCGACTGACCAGCAGCATCTGATCTGGagttcaataaaatattaaatcac

Function

symbol description
mrpl58 Predicted to enable aminoacyl-tRNA hydrolase activity and translation release factor activity, codon nonspecific. Predicted to be involved in mitochondrial translational termination. Predicted to act upstream of or within translational termination. Predicted to be part of mitochondrial large ribosomal subunit. Orthologous to human MRPL58 (mitochondrial ribosomal protein L58).

GO:

id name namespace
GO:0006415 translational termination biological_process
GO:0070126 mitochondrial translational termination biological_process
GO:0005762 mitochondrial large ribosomal subunit cellular_component
GO:0003747 translation release factor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-121214-202 Predicted to enable aminoacyl-tRNA hydrolase activity and translation release factor activity, codon nonspecific. Predicted to be involved in mitochondrial translational termination. Predicted to act upstream of or within translational termination. Predicted to be part of mitochondrial large ribosomal subunit. Orthologous to human MRPL58 (mitochondrial ribosomal protein L58).

Ensembl:

ensembl_id ENSDARG00000078835

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00008884 True 654 mRNA 0.58 6 47439 49920

Neighbor

gene id symbol gene type direction distance location
XLOC_004419 NA coding downstream 15724 65644 ~ 67780 (+)
XLOC_004420 CABZ01102038.1 coding downstream 147504 197424 ~ 202640 (+)
XLOC_004421 NA coding downstream 230221 280141 ~ 281265 (+)
XLOC_004422 NA coding downstream 237513 287433 ~ 288561 (+)
XLOC_004423 CABZ01058222.1 coding downstream 242532 292452 ~ 330202 (+)
XLOC_004426 CT737227.1 non-coding downstream 360118 410038 ~ 459295 (+)
XLOC_004429 NA non-coding downstream 492789 542709 ~ 543010 (+)

Expression


Co-expression Network