XLOC_004429



Basic Information


Item Value
gene id XLOC_004429
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 542709 ~ 543010 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00010714
ACCTCGTGATCATTAGATGTTATTAAACACCAGTATGGTGCGGCTTAATATCAACTTTAATACAAAAAAgcagccctgggagtaagtattgactaataatgaacaatagcagtacagcatttattaatgagTGCTCATTCGTTAACATGAACTATTAATGAAGGACTTTATTAGCATTATCTAatgtaaaaaataagaataaatattgaattgttcatgttaataaatacattacctaatataaaactttattttaaagtgagaCCCGAATTAAATATTGTGCTTGCCTGAATATAAATCCC

Function


GO:

id name namespace
GO:0007399 nervous system development biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00010714 True 302 lncRNA 0.29 1 542709 543010

Neighbor


gene id symbol gene type direction distance location
XLOC_004428 si:dkey-94l16.4 coding upstream 2498 532019 ~ 540211 (+)
XLOC_004427 mprip coding upstream 14683 465701 ~ 528026 (+)
XLOC_004426 CT737227.1 coding upstream 83414 410038 ~ 459295 (+)
XLOC_004425 gsg1l2b coding upstream 134633 387850 ~ 408076 (+)
XLOC_004423 CABZ01058222.1 coding upstream 212507 292452 ~ 330202 (+)
XLOC_004430 si:ch211-176g6.1 coding downstream 95425 638435 ~ 639945 (+)
XLOC_004431 abcc3 coding downstream 152609 695619 ~ 786808 (+)
XLOC_004432 wfikkn2b coding downstream 261304 804314 ~ 808443 (+)
XLOC_004433 NA coding downstream 349168 892178 ~ 895643 (+)
XLOC_004434 NA coding downstream 359578 902588 ~ 903652 (+)
XLOC_004422 NA non-coding upstream 254148 287433 ~ 288561 (+)
XLOC_004421 NA non-coding upstream 261444 280141 ~ 281265 (+)
XLOC_004419 NA non-coding upstream 474929 65644 ~ 67780 (+)
XLOC_004436 NA non-coding downstream 531393 1074403 ~ 1078180 (+)
XLOC_004444 NA non-coding downstream 1423663 1966673 ~ 2004160 (+)
XLOC_004450 NA non-coding downstream 2035010 2578020 ~ 2607032 (+)

Expression



Co-expression Network