XLOC_000443



Basic Information


Item Value
gene id XLOC_000443
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 38183799 ~ 38187194 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00003092
ACCGGTTACCTTGTCCCAACTCCATACTTCAACGTATTAACCACAAGCAGTGAGCTTACTTTTGTGTTTTACCACATGTCATGTGAGGTTATTTTACAGTCTGTTGCATATGCAAGGTATGTTATATGTGCACAGTAACATATGTTTTCATGATTGAAAAACTGACTGGCCATATGTGTATCGCGCACAGATATAAAGATGTCTAAGAAATGGTATACCATTGTTGATACTAGAATCCCAGTTTCAACATTTGGGCCATCTCCGTGTGACACATCATTCATCAATTAATTTTCAGTCTATGCAACgagagattttttattattattttctttttccgTTCGGTACTGCTTTCATATCCATTTTATTAGGCTATATGACCATGCATTTCACAGACATTACGACTCCTAGCCTATCAATGTATCTCAAACTATGAGCAATAATTATATGTATTTTGTACATGCTAATTAAGGATATTTAATTAGTACAATCAaccagAAACTGTCAATTTGTGTGCATTTTACTGTGCACACTGATTTTAAAACAAGGTGCATGCATAACACGCAAGTTTTATTTGTAAACGTTTAGTGTGAGGTGAGTTCTTTGAAAGTCACTTCACAATGTCTTTCTTTGACAGTTAGACAGTTAAAACCTC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00003092 True 652 lncRNA 0.35 2 38183799 38187194

Neighbor


gene id symbol gene type direction distance location
XLOC_000441 galnt7 coding upstream 12893 38142354 ~ 38170906 (+)
XLOC_000438 GALNTL6 coding upstream 51187 37752171 ~ 38132612 (+)
XLOC_000440 CT583668.1 coding upstream 187222 37996459 ~ 37996577 (+)
XLOC_000439 NA coding upstream 349407 37833347 ~ 37834392 (+)
XLOC_000437 si:dkey-6f10.4 coding upstream 479616 37701261 ~ 37704183 (+)
XLOC_000444 NA coding downstream 156126 38343320 ~ 38346108 (+)
XLOC_000445 cep44 coding downstream 175154 38362348 ~ 38374799 (+)
XLOC_000446 BX649481.1 coding downstream 478560 38665754 ~ 38753029 (+)
XLOC_000447 wdr17 coding downstream 571067 38758261 ~ 38803495 (+)
XLOC_000448 spcs3 coding downstream 631074 38818268 ~ 38822167 (+)
XLOC_000436 NA non-coding upstream 545432 37591258 ~ 37638367 (+)
XLOC_000432 FO704615.1 non-coding upstream 1060027 37123642 ~ 37123772 (+)
XLOC_000431 NA non-coding upstream 1217517 36966000 ~ 36966282 (+)
XLOC_000449 NA non-coding downstream 662435 38849629 ~ 39022832 (+)
XLOC_000451 NA non-coding downstream 845946 39033140 ~ 39033591 (+)
XLOC_000452 NA non-coding downstream 873243 39060437 ~ 39200709 (+)

Expression



Co-expression Network