XLOC_000446 (BX649481.1)



Basic Information


Item Value
gene id XLOC_000446
gene name BX649481.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 38665754 ~ 38753029 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00000779
TTAGTGCAACTTTATGGTGCGACTCACATGGTAAAGACATCCAGGGCATCAACAGGCGACCGGACGACATCAAAGTAGGTCTGCAGGATGGTGACGGTGCCAGAAAGAGCCTCATGTCCACAGCCACAGAAGAGAGCAACACCGGCGTACAGCAGGATAGTGGCGATCAGAGAGGCATACGGGATCCCACTCAGACATTTGAGGCAGCATTCAGAGCAACCTGTCAACAACAGCAAGAGTCAGGAAATGGTGGAAATGGTGGAAAAGGGGAACCGTATCCAGGCAGTCACTCTTTTCCATTAGAGAACAATGGATTTTCCAGGTCTTGAGGCCGTTAACATCAAGAACAAAAACTTAAACAATGGTAACTACTGTGTACTGATTGAACTATATTAAGACGAAAACTGTGGTTTATTGCCATTTGTGCAGTTGCATTCTCAAGCAACAAACTAATCTAAAGCTACATAGCGGTTTAATCCCGATTCCTAGTGTTCCCTTTGAAGTGTGCATGTGGAAATGCTcttaatttcacaattttaaaGTCCTTAgttt

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095811

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00000779 True 552 processed_transcript 0.44 2 38665754 38753029

Neighbor


gene id symbol gene type direction distance location
XLOC_000445 cep44 coding upstream 290955 38362348 ~ 38374799 (+)
XLOC_000444 NA coding upstream 319646 38343320 ~ 38346108 (+)
XLOC_000442 NA coding upstream 341719 38171857 ~ 38324035 (+)
XLOC_000443 NA coding upstream 478560 38183799 ~ 38187194 (+)
XLOC_000441 galnt7 coding upstream 494848 38142354 ~ 38170906 (+)
XLOC_000447 wdr17 coding downstream 5232 38758261 ~ 38803495 (+)
XLOC_000448 spcs3 coding downstream 65239 38818268 ~ 38822167 (+)
XLOC_000449 NA coding downstream 96600 38849629 ~ 39022832 (+)
XLOC_000450 CU915762.1 coding downstream 105370 38858399 ~ 38859425 (+)
XLOC_000451 NA coding downstream 280111 39033140 ~ 39033591 (+)
XLOC_000440 CT583668.1 non-coding upstream 669177 37996459 ~ 37996577 (+)
XLOC_000439 NA non-coding upstream 831362 37833347 ~ 37834392 (+)
XLOC_000452 NA non-coding downstream 307408 39060437 ~ 39200709 (+)
XLOC_000454 BX322797.1 non-coding downstream 760712 39513741 ~ 39513857 (+)
XLOC_000455 BX324208.1 non-coding downstream 856804 39609833 ~ 39609950 (+)

Expression



Co-expression Network