XLOC_004462 (tmem101)


Basic Information

Item Value
gene id XLOC_004462
gene name tmem101
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 3262564 ~ 3273072 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00008939
AATACACTTCCGCCATCCTGAGCTATGGCTGCTGCAACCCGCAAGAAAGCACTGAGATTTTTCTCTCAGTTCGGAGCTTTTATTCTGACCCGGTTCGGCTTCTGGAACTGCTTCGCCATGTTGATGCTGTTCGCGGAGCGCGCCGACGTCAAACGGAAGCCAGACATCCAGGTGCCCTACCTGTACATAGATCTGGGAGCTGCAGTGCTGTGTGCCAGTTTCATGTCGTTTGGTGTGAAGAGAAGATGGTTCGCGCTGGCAGCTGCCATTCATCTGGCCCTCAGCACCTATGTGTCCTATGTGGGAGGGCAAGTCCATTATGGAGACTGGCTGAAGGTACGGATGTACTCCCGAGCAATGGCCATCATCGGAGGCTTTCTGATTCTGTCCAGCGGAGCGGGAGAGGTTTACAGACAGAAACCCCGCACACGCTCACTGCAGTCCACCGGACAGGTCTTCCTGGGCATTTACTTGATATGTATGGTGTACTCGCTGCAGCACAGTAAGGAGGACCGGCTGGCCTATCTGGACCACATTCCCGGAGGAGAGCTGACTGTTCAGCTGCTGGTGCTGGTGTTCGGTGTGCTGGCGCTCGCATACCTGTCTGGATGTTACGTGCGCGTGGCTTCACAGATCCTGGCTGTCCTCTTACCGCTGGTCATCCTCTTCATCGACGGTAACTTCGGTTATTGGCACCGCAGCTGCCGTGTGGAGTTCTGGAACCAGATGAAGCTCATCGGGCAGAACGTGGGCATCTTCGGAGCCGTGCTCATTTTGGCCACCGACAGCTAAACATGCGTGAAAGATCTCCGTACAAGGACAAACGGTGAGCTCGTGCGTGTCTCAGGGGATCATTTTGATGACGTTAATGCTCTGAACATTCAAAGGTGCAGAGGATGCAATTCTCAGCTCGCTTTTTGGAGTATCAGATCGCGAGCGTAAAGTCTTCTGAAGgctgtttacattacattttgtttgctttttttattatgcGTTATTTAAAAGAACGACTACAAGTCTTAATAGTTAAAGTTGAATGctgatttaaaggggtagttcacgcaCAAATGGAAAGTtgctcattatttattcacccacAAGTCGTTTCCAttcattttgagtttatttttttctgttgaacataaaagaagatattttgaagaatgctgaaatcctgtaaccattgacttctgtagtaggaAAAagcaaatgctatggaagtcaatggttgcaactttttttaaaatatcttttcgcatttaacagataaaagaaacacgggtttgaaacaagtaaaagatgACAAAACTgtaatttttgcgtgaactatccctattAAGGGAACAACAATGAGTGTTAATAGGTAAAATAAAGTTGAATGctgatttaaaggggtagttcacgcaCAAATGGAAATTtgctcattatttattcacccacAAGTCGTTTCCAttcattttgagtttatttttttctgttgaacacaaaagaagataatttgaagaatgctaaaatcctgtaaccattgacttctgtagtaggaAAACACTTGCCATGGGAGTCAGTggttgcagctttcttcaaaatatctttttttgttcaGCAGATGAAAGAAACACAAGTTTGAAacatgtaaatgatgacagaagtgtaatttttgggtgaactatccctattaAGGGGACGACGATGAGTCTTACCAGTTAAATTAAAGTTGAatgcttaaaggtatagttcacggAAAAATGGAaatttgcttattatttattcaccctccagTAATTTCCAttcattttgagtttattttgttttctgttgaacacaaaagaagatgatttgaagaatgctgaaatcctgtaaccattgacttctatagtagaaaaaaacaaatactatggaagtcattagttacaggttttcagctttcttcaaaacatcttattttctgttcaacagatgaaagaaacacgggtttgaaacaagtaagtgatgacagaattgttatttttggatgaactatccctatTAAGGAGACGACGGTGAGTCTTAATAGTTGAAGTTGAATGctgatttaaaggggtagttcacacacaaatggaaatttgctcattatttattcaccctcaagtcgTTTCCATTcaatttgagtttattttatttttgttgaacacaaaagaagataatttgaagaatgctgaaatcctgtaaccattgacttctgtagtaggaAAACAcatgctatggaagtcagtggttgcagctttcttcaatatatcctcttttgtgttcaacagataaatgaaacaggtttgaaataagtaaatgatgacagaatttttttttttttgggtgaactatccctattaAGTGGACAACGATGAGTCTTAATAGTTAAATTAAAGTTGAATGctgatttaaaggggtagttcacacacaaatggaaatttgctcattatttattcacccacATGTCGTTTTCAttcattttgagtttatttttttctgttgaacacaaaagaagatattttgaaaaatgctgaaatcctgtaaccattgacttgtaggaaaacaaatactatggaagtcaatggttgcagctttcttcaaaatatcttcttttgtgttcaacagataaaagaaacacaagtttgaaacaagtaaatgatgacagaagtgtaatttttgggtgaactatccctattaAGGGGACGACGATGAGTTTTACCAGTTAAATTAAAGTTGAatgcttaaaggtatagttcacggAAAAATGGAaatttgcttattatttattcaccctcaagtaaTTTCCAttcattttgagtttattttttctgttgaacacaaaagaagataatttgaagaatgctgaaatcctgtaaccattgacttgtataGTAGGAAAACAcatgctatggaagtcagtggttgcagctttcttcaaaatatcctcttttgtgttcaaaagataaatgaaacaggtttgaaacaagtacatgatgacagaattgtaatttttttgtgaactatccctataatgGGGACGACGATGAGCAGCGTTAATAGTTAAATTAAAGTTGAATGCTGATTTAAAAAGGTAGTTCACGTACAAATGGAAATTTGCTCATTATTTATTCGTTTCCATtcaatttgagtttatttttttccgttgaacacaaaagaagataatttgaagaatgctgaaatcctgtaaccattgacttctgtagtaggaaaacaaatactatggaagtcaatggttgcaactttttttaaaatatcttttcgtgtgttcaacagatgaaagaaacccataaagggttgaaacaagtaaatgatgacagaattgtaatttttgggtgaactatccctattaAAGGGAGTTTGTAAAcattatttcatgtttttcagCTATGTTACAGACATTTCTCATGACACTgcatttttttgctgcttgtaatAATTTTGCATTCCTGATACAACTTCTGTAAAAGCGTCACAATGTCAAATAAAATCGTTTTGTATGCAATCTA

Function

symbol description
tmem101 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM101 (transmembrane protein 101).

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-121214-289 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM101 (transmembrane protein 101).

Ensembl:

ensembl_id ENSDARG00000114508

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00008939 True 3533 mRNA 0.38 4 3262564 3273072

Neighbor

gene id symbol gene type direction distance location
XLOC_004461 sgca coding upstream 169540 3078221 ~ 3093024 (+)
XLOC_004460 rac3b coding upstream 220535 3022882 ~ 3042029 (+)
XLOC_004459 lrrc45 coding upstream 242717 2993523 ~ 3019847 (+)
XLOC_004458 prkar1ab coding upstream 366762 2870671 ~ 2895802 (+)
XLOC_004457 mms19 coding upstream 414276 2804505 ~ 2848288 (+)
XLOC_004463 g6pc3 coding downstream 28077 3301149 ~ 3310677 (+)
XLOC_004464 coa3a coding downstream 298698 3571770 ~ 3574657 (+)
XLOC_004465 pagr1 coding downstream 450578 3723650 ~ 3732014 (+)
XLOC_004466 cabp5a coding downstream 575037 3848109 ~ 3861759 (+)
XLOC_004467 nif3l1 coding downstream 598380 3871452 ~ 3909738 (+)
XLOC_004456 NA non-coding upstream 490174 2769565 ~ 2772390 (+)
XLOC_004450 NA non-coding upstream 655532 2578020 ~ 2607032 (+)
XLOC_004444 NA non-coding upstream 1258404 1966673 ~ 2004160 (+)
XLOC_004436 NA non-coding upstream 2184384 1074403 ~ 1078180 (+)
XLOC_004434 NA non-coding upstream 2358912 902588 ~ 903652 (+)
XLOC_004469 NA non-coding downstream 713007 3986079 ~ 3991423 (+)
XLOC_004471 NA non-coding downstream 819380 4092452 ~ 4093573 (+)
XLOC_004472 NA non-coding downstream 830716 4103788 ~ 4106410 (+)
XLOC_004478 NA non-coding downstream 1135587 4408659 ~ 4450452 (+)
XLOC_004479 NA non-coding downstream 1155051 4428123 ~ 4473148 (+)

Expression


Co-expression Network