XLOC_004463 (g6pc3)


Basic Information

Item Value
gene id XLOC_004463
gene name g6pc3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 3301149 ~ 3310677 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00008940
GCAAAACATGACACATCTGTCCATCTGACAGTTGATTCTCAGAGTCTGGAAGATGAAAAGTGGAAATTAATTTTATTCCTGGACGTTTATTGAACATCTTATAATGGAGAGCGTCTACCGGCAGGGCGTGTGGATGGCGGAAGCCCTTCAGCAGAAAAGCAGAAGTTTGGAGGATATGTGGCTCGTCGCTTCTCATATGGGAGACCCGAAAGCCGCGGTTCTGCTGGTTTTCCCCGTCGTGTTTTACATACATCGCCGGACAGGCATCGCTGTGCTCtgggtagcagctctttcagagTGGCTTAATCTGGTTCTTAAATGGATCCTCTTTGGCGAGAGGCCTTACTGGTGGATTGGACAATCTGGCTTGTTTTCTGAAAAGCCTCCAGAAGTGCAGCAGTTTCAGTCCACCTGTGAGAGCGGTCCAGGCAGTCCGTCGGGTCACGCTATGGTCACCAGTGCAGTATGGTGGGTGATCGTCTCTTCTCTGGCCTCCTTCAGTCAAGCTTACACAGGCAGTAAGATATTATCCGCAGTGCTGTATCTGCTGTATGCAGTGTTTCTGGGATGTGTAGGCCTTTCTCGGATCTTCATCCTGGCTCATTTTCCTCATCAGGTCGTTGCAGGTTTTCTGACAGGTGTGCTTCTGGGGGTGTTTCTGAAGCGCTCTGTGCCTGAACGGCGCCCTCTGCTGTTCTTCTTTCGCTTCAGCATGGCTCTGCTCGGTGCTGCTCTTATTTTCCACGCTGTTCTGGAAAAAACGGGGATCGATCTTTCTTGGTCCATCTCTCTGGCCAAGCGCTGGTGTTCTCGCTCTGAGTGGGTCCGGATGGACACTGCGCCCTTTTCCTCCCTTAACCGTGACGCTGGGGTTCTCTTAGGACTGGGCCTGGCGCAGTACTGGAAGCCTGGCGGATGGACTCTTCCTCGGGCCCCCAGGACTCTCTGTCTTGCCCTGTCGTCTCTGGCCCTGCACTACATCAGCAGGTTCCCTCTGCCCACTGTCCCTCCTCTTCTCTTCTACTCTCTGTTCTTCCTCAAATACAGCATCGTGCCGCAGGTGGTCATGGTGCTGGTGCCTGGATTCGTCCATTTACTCACAGCCAAACCCAAGAGGGAGTAAAAGTACATGTTGAGGCTTTTGGCCATGAAAATTGAAAGTTCATAACACAAAATAAGCAAAGCTCTAAGATCGATTATAAAGGTGATTTggtcacgctttattttgatggtctgtttgttgaatttaagttacaattcatctacatgtcaactaattctcattagattatgagactgtttggttggggttagggttagcgATAGTTGACATGTActcgcaaagtttcttatagtcagttacatgtttgttgaaggagcagtatcaacagatattaggcagacagtctactaatactcaaatggaccatcaaaataaattgttaccgTTGTTTTAACTATAAAGAGACAATGTCGTTGCCTGCAGCTTTAAAGATTTCTTTAGCAAACAAAAGTGACGTGGACTGaagtaaatttatttagtttgtgcCAAAGAAACTCTTAAGGGAAaagttttgttgctgttgttctgTTTTGATTGTTTACtctatttacttgttcattttcaAGTCATTTGAGTGGTCTCTTCTTGAATAGAAGCCATTTTTCTTGCTTATAATAGTATAGAAATGATATTTTCTCTAAGAAATCAATTTAGAAAAGttgcttttttttgtctttagtcAAAGTTCTTTTGTGAAAAGATCCCCTTTCACACTGATTAcaccaaaaatgaataaaaacaagatGGGATATGCATGTG

Function

symbol description
g6pc3 Predicted to enable glucose-6-phosphatase activity. Acts upstream of or within hematopoietic progenitor cell differentiation. Predicted to be located in endoplasmic reticulum membrane. Predicted to be integral component of membrane. Predicted to be active in membrane. Is expressed in ventral wall of dorsal aorta. Human ortholog(s) of this gene implicated in severe congenital neutropenia 4. Orthologous to human G6PC3 (glucose-6-phosphatase catalytic subunit 3).

GO:

id name namespace
GO:0051156 glucose 6-phosphate metabolic process biological_process
GO:0006094 gluconeogenesis biological_process
GO:0005783 endoplasmic reticulum cellular_component
GO:0005789 endoplasmic reticulum membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0016787 hydrolase activity molecular_function
GO:0004346 glucose-6-phosphatase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-061215-19 Predicted to enable glucose-6-phosphatase activity. Acts upstream of or within hematopoietic progenitor cell differentiation. Predicted to be located in endoplasmic reticulum membrane. Predicted to be integral component of membrane. Predicted to be active in membrane. Is expressed in ventral wall of dorsal aorta. Human ortholog(s) of this gene implicated in severe congenital neutropenia 4. Orthologous to human G6PC3 (glucose-6-phosphatase catalytic subunit 3).

Ensembl:

ensembl_id ENSDARG00000020371

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00008940 True 1822 mRNA 0.45 7 3301149 3310677

Neighbor

gene id symbol gene type direction distance location
XLOC_004462 tmem101 coding upstream 28077 3262564 ~ 3273072 (+)
XLOC_004461 sgca coding upstream 208125 3078221 ~ 3093024 (+)
XLOC_004460 rac3b coding upstream 259120 3022882 ~ 3042029 (+)
XLOC_004459 lrrc45 coding upstream 281302 2993523 ~ 3019847 (+)
XLOC_004458 prkar1ab coding upstream 405347 2870671 ~ 2895802 (+)
XLOC_004464 coa3a coding downstream 261093 3571770 ~ 3574657 (+)
XLOC_004465 pagr1 coding downstream 412973 3723650 ~ 3732014 (+)
XLOC_004466 cabp5a coding downstream 537432 3848109 ~ 3861759 (+)
XLOC_004467 nif3l1 coding downstream 560775 3871452 ~ 3909738 (+)
XLOC_004468 tbx6 coding downstream 601867 3912544 ~ 3923070 (+)
XLOC_004456 NA non-coding upstream 528759 2769565 ~ 2772390 (+)
XLOC_004450 NA non-coding upstream 694117 2578020 ~ 2607032 (+)
XLOC_004444 NA non-coding upstream 1296989 1966673 ~ 2004160 (+)
XLOC_004436 NA non-coding upstream 2222969 1074403 ~ 1078180 (+)
XLOC_004434 NA non-coding upstream 2397497 902588 ~ 903652 (+)
XLOC_004469 NA non-coding downstream 675402 3986079 ~ 3991423 (+)
XLOC_004471 NA non-coding downstream 781775 4092452 ~ 4093573 (+)
XLOC_004472 NA non-coding downstream 793111 4103788 ~ 4106410 (+)
XLOC_004478 NA non-coding downstream 1097982 4408659 ~ 4450452 (+)
XLOC_004479 NA non-coding downstream 1117446 4428123 ~ 4473148 (+)

Expression


Co-expression Network