Item | Value |
---|---|
gene id | XLOC_004470 |
gene name | zgc:123217 |
gene type | coding |
species | zebrafish (Danio rerio) |
category of species | model fish |
Item | Value |
---|---|
chromosome id | NC_007123.7 |
NCBI id | CM002896.2 |
chromosome length | 49182954 |
location | 4036409 ~ 4044132 (+) |
genome version | GRCz11_2017_zebrafish_Genome |
symbol | description |
---|---|
zgc:123217 | Predicted to enable serine-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in extracellular space. |
id | name | namespace |
---|---|---|
GO:0006508 | proteolysis | biological_process |
GO:0005615 | extracellular space | cellular_component |
GO:0016020 | membrane | cellular_component |
GO:0016021 | integral component of membrane | cellular_component |
GO:0004252 | serine-type endopeptidase activity | molecular_function |
GO:0016787 | hydrolase activity | molecular_function |
GO:0008233 | peptidase activity | molecular_function |
GO:0008236 | serine-type peptidase activity | molecular_function |
id | description |
---|---|
ZDB-GENE-051113-188 | Predicted to enable serine-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in extracellular space. |
ensembl_id | ENSDARG00000059026 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TCONS_00008950 | True | 1250 | mRNA | 0.45 | 6 | 4036409 | 4044132 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
XLOC_004469 | NA | coding | upstream | 44986 | 3986079 ~ 3991423 (+) |
XLOC_004468 | tbx6 | coding | upstream | 113339 | 3912544 ~ 3923070 (+) |
XLOC_004467 | nif3l1 | coding | upstream | 126671 | 3871452 ~ 3909738 (+) |
XLOC_004466 | cabp5a | coding | upstream | 174650 | 3848109 ~ 3861759 (+) |
XLOC_004465 | pagr1 | coding | upstream | 304395 | 3723650 ~ 3732014 (+) |
XLOC_004471 | NA | coding | downstream | 48320 | 4092452 ~ 4093573 (+) |
XLOC_004472 | NA | coding | downstream | 59656 | 4103788 ~ 4106410 (+) |
XLOC_004473 | si:dkey-32n7.4 | coding | downstream | 70269 | 4114401 ~ 4145033 (+) |
XLOC_004474 | itgam | coding | downstream | 103582 | 4147714 ~ 4157240 (+) |
XLOC_004475 | itgam | coding | downstream | 116672 | 4160804 ~ 4167750 (+) |
XLOC_004456 | NA | non-coding | upstream | 1264019 | 2769565 ~ 2772390 (+) |
XLOC_004450 | NA | non-coding | upstream | 1429377 | 2578020 ~ 2607032 (+) |
XLOC_004444 | NA | non-coding | upstream | 2032249 | 1966673 ~ 2004160 (+) |
XLOC_004436 | NA | non-coding | upstream | 2958229 | 1074403 ~ 1078180 (+) |
XLOC_004478 | NA | non-coding | downstream | 364527 | 4408659 ~ 4450452 (+) |
XLOC_004479 | NA | non-coding | downstream | 383991 | 4428123 ~ 4473148 (+) |
XLOC_004480 | CABZ01030103.1 | non-coding | downstream | 453232 | 4497364 ~ 4497479 (+) |