XLOC_004555 (si:ch73-103l1.2)


Basic Information

Item Value
gene id XLOC_004555
gene name si:ch73-103l1.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 10179452 ~ 10193551 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00009059
GACTTCTGTTTTGGGCTGATGACAGACTACAACTACGTTCCAGGTCCCTTCAATGGCTGATTATATTTTGTACTATTTCCAGACGTTGCTGACGCCGCTGCTGATTCTACTTGTGAGTCTGTGTCTGCTGAGATTCTGCTGCAAACACTGCAGGAAACACACAGACACTGATTCAGAACTCGACCTGACCAACAGTGACCACATCTATGTGATTCCCAATCCGATTCACATTAGAGAAGAGACAGAAGAGAGAGACCAACGAGACGAGATAGTGACTTATGGAAATCCCGAGTTCACACCCCCGCCATATGAGCTTGTGTGTCCACCACCATCATATGCAGAGGCCAGCTTTAAACTAGATATTTCTGATGTTCAAGTGACTGCCAACTCGGAGATGGAGAATTCCTACGTGTCTCCTCCACCGTACAGCCCACCTTTAGACATCACGCAAGAATAGACTGCATGCACTTCTTGTAGGTGCGTCCGAATAACTTAATAACTAACAGAATGAATGCGTTTATCTTTACATGTCTGTAATCGTGTTTCAAAGTTCATACCCAAAGTTCATAGCAAAGTCTGTCATACAATTATGCAAGAGTTCCACGGTTTATACGTCAGACATCATTCTTATCGTAAAAAAACTCAAACTTTATTGCTTTTTGAAGCACGTCTGAAGTTTATCCACATTCTGATGACCTCAATAACTGACTTGAATTAGATTAAAAATTACTTCAGAGTCAATGTCTATACAAATAAGGTAAACTAGTTTATATGAATGCCTCACAT

Function

symbol description
si:ch73-103l1.2 Predicted to be located in membrane. Predicted to be integral component of membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096505

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00009059 True 786 mRNA 0.41 4 10179452 10193551

Neighbor

gene id symbol gene type direction distance location
XLOC_004554 psmc5 coding upstream 3965 10163585 ~ 10175487 (+)
XLOC_004553 smarcd2 coding upstream 18511 10134366 ~ 10160941 (+)
XLOC_004552 si:dkeyp-118b1.2 coding upstream 53675 10115964 ~ 10125777 (+)
XLOC_004551 slc4a1b coding upstream 78948 10053852 ~ 10100504 (+)
XLOC_004550 NA coding upstream 228963 9941133 ~ 9950489 (+)
XLOC_004556 CU459020.1 coding downstream 17381 10210932 ~ 10211048 (+)
XLOC_004557 snu13b coding downstream 250234 10443785 ~ 10447178 (+)
XLOC_004558 crym coding downstream 254675 10448226 ~ 10462503 (+)
XLOC_004559 lrrc3ca coding downstream 406053 10599604 ~ 10609781 (+)
XLOC_004560 csf3a coding downstream 437715 10631266 ~ 10637172 (+)
XLOC_004546 NA non-coding upstream 366966 9797037 ~ 9812486 (+)
XLOC_004542 NA non-coding upstream 729721 9443721 ~ 9449731 (+)
XLOC_004536 NA non-coding upstream 1208420 8968317 ~ 8971032 (+)
XLOC_004533 NA non-coding upstream 1622293 8556636 ~ 8557159 (+)
XLOC_004565 CR450852.1 non-coding downstream 1450000 11643551 ~ 11643671 (+)
XLOC_004568 NA non-coding downstream 2221705 12415256 ~ 12415835 (+)
XLOC_004569 BX548041.1 non-coding downstream 2419784 12613335 ~ 12613451 (+)
XLOC_004579 BX649204.1 non-coding downstream 3263686 13457237 ~ 13457356 (+)

Expression


Co-expression Network