G55


Basic Information

Item Value
gene id G55
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 409741 ~ 410462 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU106
acacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacagacagacacacacacagacagacagacagacagacagacagacagacagacagacagacagacacacacacacacacacacacacacacacacacaggttcagCTCACAATATTTCTGTTGAGGAGGACCAGTTGTCCCAGTTTGGCGATCAGAATCTGAGTGACTGTTTTGGGGTTTCCATCACTGCTCACCAGCGGGTTACCGCTGCACGAAAACTGAACCAGACCGGGAAGCTTGGCCAGCTCGTCCACCACACgccactgagagagagacagagagagagagacagagagagagagagagagagagagagagacagagagagagaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106 True 424 lncRNA 0.62 2 409741 410462

Neighbor

gene id symbol gene type direction distance location
rbm34 LOC103399136,LOC103383372 coding downstream 19730 430192 ~ 439191 (+)
LOC120560448 NA coding downstream 41514 451976 ~ 453564 (+)
LOC120566701 NA coding downstream 47916 458378 ~ 462863 (+)
LOC120566520 NA coding downstream 60283 470745 ~ 473664 (+)
LOC120566531 NA coding downstream 76150 486612 ~ 494282 (+)
G50 LOC104942424 non-coding upstream 23093 370651 ~ 386648 (+)
G49 NA non-coding upstream 40444 369028 ~ 369297 (+)
G48 NA non-coding upstream 63834 345628 ~ 345907 (+)
G36 NA non-coding upstream 95712 313130 ~ 314029 (+)
G8 NA non-coding upstream 132273 266154 ~ 277468 (+)
G221 NA non-coding downstream 112070 522532 ~ 522989 (+)
G261 NA non-coding downstream 275983 686445 ~ 692229 (+)
G270 LOC103372508 non-coding downstream 398099 808561 ~ 811947 (+)
G195 NA non-coding downstream 474645 885107 ~ 1195250 (+)
LOC120566926 NA non-coding downstream 481159 891621 ~ 892123 (+)
rrp36 rrp36 other upstream 88962 291233 ~ 320779 (+)
fbxo3 NA other upstream 172002 70004 ~ 237739 (+)
LOC120560073 LOC103372506,LOC102203670,LOC101482513,LOC102296948 other upstream 185145 200413 ~ 224596 (+)
LOC120560058 NA other upstream 227438 158391 ~ 182303 (+)
G11 NA other upstream 336072 23490 ~ 73669 (+)
G184 NA other downstream 67509 477971 ~ 481890 (+)
G176 LOC104946033 other downstream 172928 583390 ~ 598207 (+)
LOC120566394 NA other downstream 297691 708153 ~ 753762 (+)
LOC120566368 NA other downstream 497378 907840 ~ 1012869 (+)
LOC120566414 LOC104946033 other downstream 515844 926306 ~ 1011615 (+)

Expression


Co-expression Network