G7883


Basic Information

Item Value
gene id G7883
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 26307863 ~ 26411307 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU10687
GTATGAATATTCTGtcttaaaataaatgcaaaattgCAGATAGACCTGTACAGTTATATATTCACAGTTTAATATTTTCCCTTTGAATTGCCAACATTTAGATTGAAAAGAGATAGGGTTTATTATAGACAGAACATTATAGAAATGTATAATATCCATTATTATGAGAGTATCAAAATCATGCTTAATAAAAACCTTTAATTGCCCTTTCAGTCTAATAAtcaattataaaatatatatatatatattacattacaaCTTATATTTGCAGAAATACGAAAACATGTACAAGCAAAGATCGCAAAAAATATCCAGGTTGCAAAATGCAGATCAGTTGAGCCGCTACATTCggggtgtgtttgtttgtttgtttgtttgtgtttgtgtttgtgtttgtgtgtgtaagtaagtaagtaagtaagtaagtaaataaaagGAACGATCACACCTTCTGCTGGCATTACATCTTTAGAAAATGACAAACTAAGacacctgttaaatgtttctGATCAAACTGACCAGCAGATGTATGAATAGAAAACTGATATGATTAGAACATGTTTGGCTgtgggaatatatatatatatatatatatatatatatatatatatatatatattggagaCATGTACAAAGATgctataaacaaaataaatttcTTCTCCAGAAGCTGTAAAAACAGAAAGTTGTATATCTTATGACCTTGACCTTCTATTATGAAAACTGTtgaattaaatgttattttctttaaaattacATATCCTGTGTGGCGGGCTGGAATAAAACTCATCTGCTCCTGAACAACAAATATTAAAGAGTCATTTTCCCTGCTTTACACTTTGTATTTTTCTCATATAAACGTgtcatacaataaaaaaaggcTACCATTGTGTCACATCACAAACCAAACAATAGTTCATATGGATACATAAACACGATATAAGACATTTCATTGCTTCTACCCTTAAACGAACcgagtggtgtcttttccttaCTAACACAATAATGCCCCTGCAGCAACTTTCACATTTCtgaatgaaaacataaaaaaacacttcactCCAACAATGAACGAGACCCAGagacccaaccttttttccccaACCCAAATACCAAAAGCACACCAGACCGAGTCTGCTTTTATTAAGTGCATATTTTCTTGCTGTCTGTGCCCTTAAACATGTGCATGTATGTACAAGAAAAAGCTAGCAATAGCTAccgggttgttgttttttaatcacttcATGATGCAAGCTTGTAGAGGCAGATGAggtgtgtggtgtttttataAGGTGGCGGTCCATCAAGGAGGAATTAGCATTAGCGTTATATCTCAGGTAGCTGCGCTGATGAAAGAAAGCTAGTGTGTATGACACGATGCACAGTAGGTGTAATATGATACATTCTGGAAAGTTTCACATTATATTGGCCTAGCTAGCaaataacgtgtgtgtgtgtgtttgtttaagtTCACAACTTTAACTTGAATGAATGCAGAGAAATGAGAGCTGATGTTACAAAAAGTTGCTAAAAGAAGCTTGAGCATGCTGCATGTGGCTAAAACAGAGCTGGTGTCGATGCAGTTTGGTTCTTCGGCCACAAGAGGGCACTGCTCTCAGGCCAGCTGAGACACTGCCAtctctctttcatttttttaaagtgtctgGACCTTCCACAGCTGATCAGAGGTCTAGTACAACATAATGTCAAAATGAGCTGATGATAAATCTGCAAACAGGATGGTGCGACGGTTAGATGATAAGTAAGTTGACACCGGCTCATTTTCAAGCTAATGTGGAGAAAGAGTCTAAACTTGCACCCTGAGGAACATTTCCCCACTCTCCGTTGGAGTCCAACGTTTAAGGCCAACTCTTTAAAATCCCCTATCACGTAATAGTGGTACAGTCCAACGTTGAAACCACCACCGAGTTTCTTTTAAGCTGCCTGGTTTCAGAGGGTTTCATACCAGGAGGTGGCGTTTCTTGTGCAAAGCCAGGTGGTCAGAACGGGAGAAGCTGCGTTCACAGTCGGGGCACTGGAACGGTTTGACTCCTGTGTGCTTGCGGAAGTGTCTCGTCAGCTCATCTGAACGGGCGAACTTCCACGTGCAGCCTTCCCACATGCACTTGTAGGGTTTCTCACCTGCACattgggagagagaaaaagaagacgatCAGTGAAAAAGGCTTGTAAA
>TU10689
GTATGAATATTCTGtcttaaaataaatgcaaaattgCAGATAGACCTGTACAGTTATATATTCACAGTTTAATATTTTCCCTTTGAATTGCCAACATTTAGATTGAAAAGAGATAGGGTTTATTATAGACAGAACATTATAGAAATGTATAATATCCATTATTATGAGAGTATCAAAATCATGCTTAATAAAAACCTTTAATTGCCCTTTCAGTCTAATAAtcaattataaaatatatatatatatattacattacaaCTTATATTTGCAGAAATACGAAAACATGTACAAGCAAAGATCGCAAAAAATATCCAGGTTGCAAAATGCAGATCAGTTGAGCCGCTACATTCggggtgtgtttgtttgtttgtttgtttgtgtttgtgtttgtgtttgtgtgtgtgtgtgtaagtaagtaagtaagtaagtaagtaagtaagtaagtaagtaagttacCTTGTAGCCATTGTCTTGTTTGGGGTTGTGAGAGGCGGTCACCATAATACCAGCACACAGACCCAGGTGCCAAACTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU10687 True 2194 lncRNA 0.46 2 26409094 26411307
TU10689 False 535 lncRNA 0.42 2 26307863 26411307

Neighbor

gene id symbol gene type direction distance location
pax5 pax5 coding downstream 71331 26153490 ~ 26236532 (-)
polr1e polr1e coding downstream 273441 26029630 ~ 26034422 (-)
LOC120560668 LOC103354873 coding downstream 298638 26007901 ~ 26009225 (-)
LOC120560669 LOC103354873 coding downstream 304592 26001504 ~ 26003271 (-)
camk2d2 camk2d,LOC100698346,LOC102204310,LOC106958643,LOC103469495,LOC103354871,LOC108246882,LOC107382167,LOC106904815,LOC101466566,LOC103383722,LOC102794776 coding downstream 307837 25961727 ~ 26000026 (-)
trnap-agg NA coding upstream 985 26412292 ~ 26412363 (-)
LOC120557121 NA coding upstream 13784 26425091 ~ 26435787 (-)
rfc1 rfc1 coding upstream 108171 26519478 ~ 26533118 (-)
rpl9 rpl9 coding upstream 127997 26539304 ~ 26546556 (-)
ugdh ugdh coding upstream 142727 26554034 ~ 26559727 (-)
G7871 NA non-coding downstream 6186 26245341 ~ 26301677 (-)
LOC120559970 NA non-coding downstream 116977 26190299 ~ 26190886 (-)
LOC120559965 NA non-coding downstream 117560 26189900 ~ 26190303 (-)
LOC120559960 NA non-coding downstream 117977 26188761 ~ 26189886 (-)
G7765 NA non-coding downstream 171025 26135900 ~ 26136838 (-)
G7917 NA non-coding upstream 37300 26448607 ~ 26448986 (-)
G7918 NA non-coding upstream 44270 26455577 ~ 26455783 (-)
G7921 NA non-coding upstream 81595 26492902 ~ 26495765 (-)
G7936 lias non-coding upstream 139405 26550712 ~ 26551906 (-)
G7948 NA non-coding upstream 218474 26629781 ~ 26637840 (-)
adamtsl7 NA other downstream 186214 26112014 ~ 26121649 (-)
polq LOC104947247,LOC104947243,LOC106593755 other downstream 213619 26075397 ~ 26094244 (-)
G7722 LOC103354873 other downstream 298646 26001524 ~ 26009217 (-)
G7603 LOC103353181 other downstream 519634 25783944 ~ 25788229 (-)
G7589 NA other downstream 608306 25698261 ~ 25699557 (-)
LOC120566984 NA other upstream 122526 26533833 ~ 26535736 (-)
smim14 smim14 other upstream 155760 26567067 ~ 26578815 (-)
lonrf1l lonrf1,LOC103360493,LOC102797331 other upstream 870491 27281798 ~ 27294911 (-)
rnf24 rnf24,LOC102778784 other upstream 2894714 29306021 ~ 29339847 (-)
G8701 NA other upstream 3178001 29589308 ~ 29593623 (-)

Expression


Co-expression Network