G8087 (cdk2ap2)


Basic Information

Item Value
gene id G8087
gene name cdk2ap2
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 27180034 ~ 27183685 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU10983
tcctgttatttAATTAAGATATACATACAGAACTGCAAAAATCTGGTTTACAAAATTTTCATACTAACAAATTGACTTGAGATGTACAGTGTTCTTGGGATTGAGAAACATCTAATGTGTGTTTACACTACAAaataggataaaaaaaaaaaaaattaagtggaTGGAAATGGGGTATATTCAAGATGCTCTGATTAACAAAAATATTCAGTAGTTGCAGAGTGGTGTTCAGAATAGAAACTTGAGCACAATGCAGCTGGGACATTGATgtcatttaaaaagtaaaaagaaataatgGTCAATTGCCAttattggaagaaaaaaaaaaaaaaatttaaatcccCATCCATTTTACTAAGGTTTTTACTCACAGCTCAACTTAAACGTGTTGAAATTCCCCACTCTTGTTTTTCAAAATAGATACAAAACTGCATTTTGCATACACCCCACAGTTCACATAAAAGTTTGTGATGAACAAAAGGTGGTGTGGTGAAATGCGGGGAACAGTGGAGACAAAATGGACACAATGCACCTATAAAATGCTGTTGAGGAAAGCGCAAAAAGGTGAGAGGATAAAAGAATGGTTGTAAAACAGACAATGGGGATCTTGATGAGGACAGGCTTCTACAGTGGAGGAAAAGGTTATGTGCGGGCGcttctctccgtctctgcaagacaCTCCCTGACCAGTGCACGGGCGTGGATTATACCTCTCTTTAGCCTCTCCATAGCGCTCTTGCTCCCAGCGTATGTAGGCCTGATCTCACGGCTCATCTCTTCAATGACAGACAGAAGCTCACTGTAGGTGGATCCCTGAGACACTTTGACAGGCTGTATTTTCACAATGTCATGTttgggggagaaaaaaataaaatcaatcaagaCTTGTCACAGCTGAAATTCACATCACAAGTAAAGACCAAGTTCAGTGAAAA

Function

symbol description
cdk2ap2 Orthologous to human CDK2AP2 (cyclin dependent kinase 2 associated protein 2).

NR:

description
PREDICTED: cyclin-dependent kinase 2-associated protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU10983 True 935 lncRNA 0.44 2 27180034 27183685

Neighbor

gene id symbol gene type direction distance location
ankrd49 ankrd49,LOC102800147 coding downstream 51848 27116040 ~ 27128186 (-)
si:ch211-113e8.11 NA coding downstream 113554 27064975 ~ 27066480 (-)
LOC120563023 LOC104951640 coding downstream 167613 26996161 ~ 27012421 (-)
haspin NA coding downstream 248549 26916382 ~ 26931485 (-)
ncapg ncapg coding downstream 290429 26874713 ~ 26889605 (-)
LOC120560356 aip coding upstream 424 27184109 ~ 27188645 (-)
tmem134 tmem134 coding upstream 6686 27190371 ~ 27194491 (-)
doc2d LOC103137889,LOC108231647,LOC103360491,LOC103467252,LOC106520895 coding upstream 17298 27200983 ~ 27273764 (-)
dlc1 dlc1,LOC102301936 coding upstream 121189 27304874 ~ 27398093 (-)
spock3 spock3 coding upstream 240783 27424468 ~ 27442182 (-)
G8081 NA non-coding downstream 88280 27091469 ~ 27091754 (-)
G8037 NA non-coding downstream 219118 26960423 ~ 26960916 (-)
LOC120563938 NA non-coding downstream 254242 26925166 ~ 26925792 (-)
G8027 NA non-coding downstream 265307 26896417 ~ 26914727 (-)
G8024 NA non-coding downstream 306429 26867425 ~ 26873605 (-)
G8158 NA non-coding upstream 112159 27295844 ~ 27296879 (-)
G8164 NA non-coding upstream 226364 27410049 ~ 27411464 (-)
G8180 NA non-coding upstream 293115 27476800 ~ 27483406 (-)
G8182 NA non-coding upstream 320013 27503698 ~ 27503906 (-)
G8216 mettl14 non-coding upstream 441473 27625158 ~ 27631148 (-)
smim14 smim14 other downstream 601219 26567067 ~ 26578815 (-)
LOC120566984 NA other downstream 644298 26533833 ~ 26535736 (-)
adamtsl7 NA other downstream 1058385 26112014 ~ 26121649 (-)
polq LOC104947247,LOC104947243,LOC106593755 other downstream 1085790 26075397 ~ 26094244 (-)
G7722 LOC103354873 other downstream 1170817 26001524 ~ 26009217 (-)
lonrf1l lonrf1,LOC103360493,LOC102797331 other upstream 98113 27281798 ~ 27294911 (-)
rnf24 rnf24,LOC102778784 other upstream 2122336 29306021 ~ 29339847 (-)
G8701 NA other upstream 2405623 29589308 ~ 29593623 (-)
bnc2 bnc2 other upstream 3392187 30575872 ~ 30744878 (-)
G8975 NA other upstream 3787703 30971388 ~ 30974612 (-)

Expression


Co-expression Network