G884


Basic Information

Item Value
gene id G884
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 2697529 ~ 2700077 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU1194
TTTTAGTTtgaaattaatttattattccACCAACATGCAGAATCACAGATCAGTAACTCCtctacagccaatcagagattAATAAATCCTctacagccaatcacagatGCGGCAGCACAGGAAGAAAGTTCTTCATTTACGACCAATCGCAGAACgaatataaacaaaaaattaGCTGATGTCATTGTTTTTCTGCTTCCTGCTTTTACAGGCGAGCTGTGATGTCACACACAATGCATCCTGGGAAATTAACACACGGCAGCTTGTGACTCACCGACGGTTACACTAAAAATACCATGGCAACGCTGAAACCACACGCCACTGATTACACTCCAACACGTCACATAACAAGTTAaggaattaataaataataaataattagaaaaaatacaaatctgtaaaatataaaaaaattaacaaattaaAATCTGAAAGAAATTTTAACAACGAGCAGAAAAATAAATccataaatatataaagaaatTAATTCTGATCTGCATAACAACTTTTACAAACACTTCTAGAAAAGCCGTTAGAAACATCAAACAGGAAGTCAGAAACATCAAACAGGAAGTCAGAAACATCAAACAGGAAGTCAGAAACCTTTTCAGGAAGGAAAACAACCAGGAAACATTTTCACCGCTGCGGCCTCTACATGatcctctgttttttttgggggttatcTAGATATTTCGGGGCCAAACGTCCCTGGTTCTGGATGATCTAGATATCTCCTGTTTCTAGGTGATCTAGATATTTCTGGTTCTGGGTGATATAGATATCTCTTGGTTCTAGATGATCTAGATATCTCCTGGTTCTAGATGATCTAGATATCTCCTGGTTCTAGATGATCTAGGTATTTCCTGGTTCTAGATGATCTAGATATTTCCTGGTTCTATGTGATCTAGATATCTACTGGTTCTAGATGATCTAGATATTTCCTGGTCCTATATGATCTAGATATTTCTGGTTCTAGATGATCTAGATATTTCTGGTTCTGGGTGATCTAGATATTTCTGGTTCTGGGTGATCTAGATATCTCCTGGTTCTGGGTGATCTAGATATCTCCTGGTTCTAGATGATCTAGATATCTCCTGGTTCTAGATGATCTAGGTATTTCCTGGTTCTAGATGATCTAGATATTTCCTGGTTCTATGTGATCTAGATATCTACTGGTTCTAGATGATCTAGATATTTCCTGGTCCTATATGATCTAGATATTTCTGGTTCTAGATGATCTAGATATTTCTGGTTCTGGGTGATCTAGATATTTCTGGTTCTAGATGATCTAGTTATTTCCTGGTTCTGGATGATCTAGATATCTCCTGGTTCTGGGTGATCTAGATATTTCCTGGTTCTAGATGATCTAGATATCTCCTGGTTCTAGATGATCTAGATATCTCCTAGTTCTGGGTGATCTAGATATCTCCTGGTTCTAGATGATCTAGATATTTCCTGGTTCTGGGTGATCTAGATATTTCTGGTTCTAGATGATCTAGTTATTTCCTGGTTCTAGATGATCTAGATATCTCCTGGTTCTAGATGATCTAGATATTTCCTGGTTCTGGGTGATCTAGATATTTCCTGGTTCTAGGTGATCTAGATATTTCCTGGTTCTATGTGATCTAGATATCTACTGGTTCTAGATGATCTAGATATTTCCTGGTTCTAGGTGATCTAGATATCTCCTGGTTCTAGATGATCTAGATATTTCCTGGTTCTAGGTGATCTAGATATTTCCTGGTTCTAGGTGATGTAGATATCTCCTGGTTCTAGATGATCTAGATATTTCCTGGTTCTAGGTGATCTAGATATCTCCTGGTTCTGGGTGATCTAGATATTTCCTGGTTCTAGATGATCTAGACATTTCTTGGTTCTGGATGATCTAGATATCTCCTGGTTCTGGATGATCTAGATATCTCCTGGTTCTGGGTGATCTAGATATCTCCTGGTTCTGGGTGATCTAGATATTTCTGGTTCTGGATGATCTAGATATCTCCTGTTTCTGGGTGATCTAGATATTTCTGGTTCTGGGTGATCTAGATATCTCCTGGTTCTGGATTATCTAGATATTTCCTTGTTCTAGGTGATCTAGATATTTCCTGTTTCTGGGTGATCTAGATATTTCGGGACTGTGTTTGAGTGTTTGACTGCAGCAGGTTTCCGTggtgttttacttcctgtgtgaGTTTTGGTTTCTGACCCGTCAGTCGGACCACTCCTGGTCCTCGGGCTCAGAGTCGTCCTCTGATTCACTGTACTCCACCGCGATGCGGCGCGACAGGATGGTGGCGACATCATTTCCTGTCGGCTCTCGCTTCTTGGCCTCTTCCTGTTCACGCTGCTCCTGAACCTTCCGTAGCTGGAT
>TU1203
TTTTAGTTtgaaattaatttattattccACCAACATGCAGAATCACAGATCAGTAACTCCtctacagccaatcagagattAATAAATCCTctacagccaatcacagatGCGGCAGCACAGGAAGAAAGTTCTTCATTTACGACCAATCGCAGAACgaatataaacaaaaaattaGCTGATGTCATTGTTTTTCTGCTTCCTGCTTTTACAGGCGAGCTGTGATGTCACACACAATGCATCCTGGGAAATTAACACACGGCAGCTTGTGACTCACCGACGGTTACACTAAAAATACCATGGCAACGCTGAAACCACACGCCACTGATTACACTCCAACACGTCACATAACAAGTTAaggaattaataaataataaataattagaaaaaatacaaatctgtaaaatataaaaaaattaacaaattaaAATCTGAAAGAAATTTTAACAACGAGCAGAAAAATAAATccataaatatataaagaaatTAATTCTGATCTGCATAACAACTTTTACAAACACTTCTAGAAAAGCCGTTAGAAACATCAAACAGGAAGTCAGAAACATCAAACAGGAAGTCAGAAACATCAAACAGGAAGTCAGAAACCTTTTCAGGAAGGAAAACAACCAGGAAACATTTTCACCGCTGCGGCCTCTACATGatcctctgttttttttgggggttatcTAGATATTTCGGGGCCAAACGTCCCTGGTTCTGGATGATCTAGATATCTCCTGTTTCTAGGTGATCTAGATATTTCTGGTTCTGGGTGATATAGATATCTCTTGGTTCTAGATGATCTAGATATCTCCTGGTTCTAGATGATCTAGATATCTCCTGGTTCTAGATGATCTAGGTATTTCCTGGTTCTAGATGATCTAGATATTTCCTGGTTCTATGTGATCTAGATATCTACTGGTTCTAGATGATCTAGATATTTCCTGGTCCTATATGATCTAGATATTTCTGGTTCTAGATGATCTAGATATTTCTGGTTCTGGGTGATCTAGATATTTCTGGTTCTGGGTGATCTAGATATCTCCTGGTTCTGGGTGATCTAGATATCTCCTGGTTCTAGATGATCTAGATATCTCCTGGTTCTAGATGATCTAGGTATTTCCTGGTTCTAGATGATCTAGATATTTCCTGGTTCTATGTGATCTAGATATCTACTGGTTCTAGATGATCTAGATATTTCCTGGTCCTATATGATCTAGATATTTCTGGTTCTAGATGATCTAGATATTTCTGGTTCTGGGTGATCTAGATATTTCTGGTTCTAGATGATCTAGTTATTTCCTGGTTCTGGATGATCTAGATATCTCCTGGTTCTGGGTGATCTAGATATTTCCTGGTTCTAGATGATCTAGATATCTCCTGGTTCTAGATGATCTAGATATCTCCTAGTTCTGGGTGATCTAGATATCTCCTGGTTCTAGATGATCTAGATATTTCCTGGTTCTGGGTGATCTAGATATTTCTGGTTCTAGATGATCTAGTTATTTCCTGGTTCTAGATGATCTAGATATCTCCTGGTTCTAGATGATCTAGATATTTCCTGGTTCTGGGTGATCTAGATATTTCCTGGTTCTAGGTGATCTAGATATTTCCTGGTTCTATGTGATCTAGATATCTACTGGTTCTAGATGATCTAGATATTTCCTGGTTCTAGGTGATCTAGATATCTCCTGGTTCTAGATGATCTAGATATTTCCTGGTTCTAGGTGATCTAGATATTTCCTGGTTCTAGGTGATGTAGATATCTCCTGGTTCTAGATGATCTAGATATTTCCTGGTTCTAGGTGATCTAGATATCTCCTGGTTCTGGGTGATCTAGATATTTCCTGGTTCTAGATGATCTAGACATTTCTTGGTTCTGGATGATCTAGATATCTCCTGGTTCTGGATGATCTAGATATCTCCTGGTTCTGGGTGATCTAGATATCTCCTGGTTCTGGGTGATCTAGATATTTCTGGTTCTGGATGATCTAGATATCTCCTGTTTCTGGGTGATCTAGATATTTCTGGTTCTGGGTGATCTAGATATCTCCTGGTTCTGGATTATCTAGATATTTCCTTGTTCTAGGTGATCTAGATATTTCCTGTTTCTGGGTGATCTAGATATTTCGGGACTGTGTTTGAGTGTTTGACTGCAGCAGGTTTCCGTggtgttttacttcctgtgtgaGTTTTGGTTTCTGACCCGTCAGTCGGACCACTCCTGGTCCTCGGGCTCAGAGTCGTCCTCTGATTCACTGTACTCCACCGCGATGCGGCGCGACAGGATGGTGGCGACATCATTTCCTGTCGGCTCTCGCTTCTTGGCCTCTTCCTGTTCACGCTGCTCCTGAACCTTCCGTAGCTGGAT

Function

GO:

id name namespace
GO:0021591 ventricular system development biological_process
GO:0021592 fourth ventricle development biological_process
GO:0007417 central nervous system development biological_process
GO:0007420 brain development biological_process
GO:0030902 hindbrain development biological_process
GO:0060322 head development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1194 True 2368 lncRNA 0.41 3 2697529 2700077
TU1203 False 2368 lncRNA 0.39 3 2697529 2700077

Neighbor

gene id symbol gene type direction distance location
LOC120566159 NA coding upstream 113267 2572980 ~ 2584262 (+)
LOC120561353 LOC102083160 coding upstream 303242 2362732 ~ 2394287 (+)
mrps28 mrps28 coding upstream 429906 2266855 ~ 2267623 (+)
mtif2 mtif2 coding upstream 450595 2228163 ~ 2246934 (+)
LOC120566049 NA coding upstream 477676 2211994 ~ 2219853 (+)
LOC120561808 srf,LOC103372093 coding downstream 158427 2858504 ~ 2881120 (+)
eif4a3 eif4a3 coding downstream 182846 2882923 ~ 2891005 (+)
tmem178 tmem178a,LOC102307988 coding downstream 238020 2938097 ~ 2977429 (+)
LOC120557776 NA coding downstream 409514 3109591 ~ 3128050 (+)
LOC120557788 LOC100703858,LOC102778772,LOC103375691,LOC101465362,LOC107082671 coding downstream 457126 3157203 ~ 3159292 (+)
G886 NA non-coding upstream 2139 2694227 ~ 2695390 (+)
LOC120566193 NA non-coding upstream 27774 2658402 ~ 2669755 (+)
G865 NA non-coding upstream 108453 2588721 ~ 2589076 (+)
G857 NA non-coding upstream 126029 2571292 ~ 2571500 (+)
G731 NA non-coding upstream 311985 2385155 ~ 2385544 (+)
G937 NA non-coding downstream 164880 2864957 ~ 2866763 (+)
G936 NA non-coding downstream 175497 2875574 ~ 2877107 (+)
G939 NA non-coding downstream 197320 2897397 ~ 2910958 (+)
G941 NA non-coding downstream 204259 2904336 ~ 2910703 (+)
G954 NA non-coding downstream 239278 2939355 ~ 2939795 (+)
LOC120566146 LOC107082675,LOC108251143,LOC103383281 other upstream 127075 2558876 ~ 2570454 (+)
G714 LOC103375176,LOC105920176,LOC100706186,LOC101468385 other upstream 351481 2307285 ~ 2346048 (+)
LOC120566000 NA other upstream 730274 1946145 ~ 1967255 (+)
G363 LOC104946033,LOC104961227 other upstream 817983 1593822 ~ 1879546 (+)
LOC120567073 sos1 other downstream 294952 2995029 ~ 3080190 (+)
LOC120567079 NA other downstream 368321 3068398 ~ 3071473 (+)
LOC120557752 LOC104935435,LOC108250455,LOC106524354,LOC101471560,LOC103371946,LOC102291612 other downstream 428012 3128089 ~ 3157138 (+)
dzank1 NA other downstream 475524 3175601 ~ 3259758 (+)
LOC120555387 LOC106675676,LOC106675675 other downstream 768047 3468124 ~ 3480130 (+)

Expression


Co-expression Network