G8880



Basic Information


Item Value
gene id G8880
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 30450331 ~ 30450686 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU12007
TTTGCTGATGAAGTCTGGAGCAATGTCCGGCGTGTTGCTGAACTCTCCGCACACTTGCAAGTCGCTGACACAGCAGATGGCATCCCTGAGCTCTGCCAAGCTGTGGGAGCCCGTCATCAGCAGAGTTATGTGGGGTCTGCTGTAGATAaactTCATAAACAGCGGGGTAGTAGACGTTAATGGTTAGAATGACTTCTCCTTCAGGGACCATGTCAGTCACTGCTTCTGGTTTCCTACCGACAGTTAAGCG

Function


NR:

description
PREDICTED: B-cell lymphoma 6 protein homolog

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU12007 True 250 lncRNA 0.44 2 30450331 30450686

Neighbor


gene id symbol gene type direction distance location
LOC120569182 ttc39b,LOC103361331,LOC103383857 coding downstream 3232 30440382 ~ 30447099 (-)
dnajb14 dnajb14 coding downstream 11276 30424606 ~ 30439055 (-)
pla2g12a pla2g12a coding downstream 26309 30418495 ~ 30424022 (-)
LOC120560609 casp6 coding downstream 42639 30401440 ~ 30407692 (-)
lef1 lef1 coding downstream 129368 30278527 ~ 30320963 (-)
psip1a psip1 coding upstream 3664 30454350 ~ 30464962 (-)
spag5 NA coding upstream 482063 30932749 ~ 30950945 (-)
trmo NA coding upstream 504936 30955622 ~ 30960798 (-)
hemgn NA coding upstream 511050 30961736 ~ 30964319 (-)
coro2aa LOC103364489,LOC104937679 coding upstream 524869 30975555 ~ 31012392 (-)
G8843 NA non-coding downstream 95679 30354438 ~ 30354652 (-)
G8834 hadh,LOC103384097 non-coding downstream 176981 30271464 ~ 30273350 (-)
G8790 NA non-coding downstream 442348 30006394 ~ 30007983 (-)
G8707 NA non-coding downstream 829847 29620019 ~ 29620484 (-)
G8704 NA non-coding downstream 834931 29615125 ~ 29615400 (-)
G8890 NA non-coding upstream 248451 30699137 ~ 30699343 (-)
G8952 NA non-coding upstream 358685 30809371 ~ 30899158 (-)
G9081 NA non-coding upstream 662930 31113616 ~ 31120342 (-)
G9104 NA non-coding upstream 804400 31255086 ~ 31255294 (-)
G9106 NA non-coding upstream 806126 31256812 ~ 31257123 (-)
G8701 NA other downstream 856708 29589308 ~ 29593623 (-)
rnf24 rnf24,LOC102778784 other downstream 1110484 29306021 ~ 29339847 (-)
lonrf1l lonrf1,LOC103360493,LOC102797331 other downstream 3155420 27281798 ~ 27294911 (-)
smim14 smim14 other downstream 3871516 26567067 ~ 26578815 (-)
LOC120566984 NA other downstream 3914595 26533833 ~ 26535736 (-)
bnc2 bnc2 other upstream 125186 30575872 ~ 30744878 (-)
G8975 NA other upstream 520702 30971388 ~ 30974612 (-)
znf827 znf827,LOC102789810 other upstream 1483951 31934637 ~ 32006542 (-)
LOC120567365 NA other upstream 1771271 32221957 ~ 32226423 (-)
lrba NA other upstream 2134038 32584724 ~ 32781154 (-)

Expression



Co-expression Network