G886


Basic Information

Item Value
gene id G886
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 2694227 ~ 2695390 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU1208
CACGACCTCATGTTACAGCGTGATAATACACGGTCTCATGTTACAGCGTGATAATACACGGTCTCATGTTACAGCGTGATAATACACGGTCTCATGTTACAGACTGATAATACACGACCTCATGTTACAGCGTGATAATACACGGTCTCATGTTACAGCGTGATAATACACGGCCTCATGTTACAGCGTGATAATACACGGTCTCATGTTACAGAGTGATAATACACGGCCTCATGTTACAGCGTGATAATACACGGCCTCATGTTACAGCGTGATAATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1208 True 281 lncRNA 0.52 3 2694227 2695390

Neighbor

gene id symbol gene type direction distance location
LOC120566159 NA coding upstream 109965 2572980 ~ 2584262 (+)
LOC120561353 LOC102083160 coding upstream 299940 2362732 ~ 2394287 (+)
mrps28 mrps28 coding upstream 426604 2266855 ~ 2267623 (+)
mtif2 mtif2 coding upstream 447293 2228163 ~ 2246934 (+)
LOC120566049 NA coding upstream 474374 2211994 ~ 2219853 (+)
LOC120561808 srf,LOC103372093 coding downstream 163114 2858504 ~ 2881120 (+)
eif4a3 eif4a3 coding downstream 187533 2882923 ~ 2891005 (+)
tmem178 tmem178a,LOC102307988 coding downstream 242707 2938097 ~ 2977429 (+)
LOC120557776 NA coding downstream 414201 3109591 ~ 3128050 (+)
LOC120557788 LOC100703858,LOC102778772,LOC103375691,LOC101465362,LOC107082671 coding downstream 461813 3157203 ~ 3159292 (+)
LOC120566193 NA non-coding upstream 24472 2658402 ~ 2669755 (+)
G865 NA non-coding upstream 105151 2588721 ~ 2589076 (+)
G857 NA non-coding upstream 122727 2571292 ~ 2571500 (+)
G731 NA non-coding upstream 308683 2385155 ~ 2385544 (+)
G725 NA non-coding upstream 332388 2347168 ~ 2361839 (+)
G884 NA non-coding downstream 2139 2697529 ~ 2700077 (+)
G937 NA non-coding downstream 169567 2864957 ~ 2866763 (+)
G936 NA non-coding downstream 180184 2875574 ~ 2877107 (+)
G939 NA non-coding downstream 202007 2897397 ~ 2910958 (+)
G941 NA non-coding downstream 208946 2904336 ~ 2910703 (+)
LOC120566146 LOC107082675,LOC108251143,LOC103383281 other upstream 123773 2558876 ~ 2570454 (+)
G714 LOC103375176,LOC105920176,LOC100706186,LOC101468385 other upstream 348179 2307285 ~ 2346048 (+)
LOC120566000 NA other upstream 726972 1946145 ~ 1967255 (+)
G363 LOC104946033,LOC104961227 other upstream 814681 1593822 ~ 1879546 (+)
LOC120567073 sos1 other downstream 299639 2995029 ~ 3080190 (+)
LOC120567079 NA other downstream 373008 3068398 ~ 3071473 (+)
LOC120557752 LOC104935435,LOC108250455,LOC106524354,LOC101471560,LOC103371946,LOC102291612 other downstream 432699 3128089 ~ 3157138 (+)
dzank1 NA other downstream 480211 3175601 ~ 3259758 (+)
LOC120555387 LOC106675676,LOC106675675 other downstream 772734 3468124 ~ 3480130 (+)

Expression


Co-expression Network