G9081


Basic Information

Item Value
gene id G9081
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 31113616 ~ 31120342 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU12261
TTCCTACTATGAATTTTACGTGTGTTCACTGACCAAGAACAGGAAATGGTTTGCCATTTCTGCTGCAAGACAGTAAACCAGAACTGTTGGACTCATTGTTGCTACAAATATTACACATACAGATTTTGAAACCACACACTAACCTTTTCCATCTCCTCCcagttgtagttgttgttgcCGACCACCATGGCCATCAGCTCAGAGGGCTGGAACAGCGACAGGATATCCCCCCCGCACACCTTCAGGAAGCCAGAGGAGAAGGCCGAGTACTGCTCGCTCACCGAGTCTGAGAACACGTAGCGCAGCTCAGAGGACAGGTTACCTGGCCTCGGTGGGGGAGAGCTCCTTGAAGTCCTCCAGCTTTGATGGCACATTGAGCAGCTTCTTGTAGAGAACGAGTGGGAAGTGGAGGTCCACCACTGTGGAGTTGTAGATGGCCAGACCGCAGATGATCCCGATCAGGTGAAACCAGTTCTGCTCAACAAAACA

Function

GO:

id name namespace
GO:0090304 nucleic acid metabolic process biological_process
GO:0006139 nucleobase-containing compound metabolic process biological_process

KEGG:

id description
ko03440 Homologous recombination
ko03460 Fanconi anemia pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU12261 True 489 lncRNA 0.38 2 31113616 31120342

Neighbor

gene id symbol gene type direction distance location
ppm1kb ppm1k coding downstream 17742 31083002 ~ 31095874 (-)
abcg2d LOC102784225,LOC100701664,LOC101478577,LOC102307338 coding downstream 31559 31068620 ~ 31082057 (-)
g3bp2a g3bp2 coding downstream 58628 31044731 ~ 31054988 (-)
uso1 uso1 coding downstream 74920 31017317 ~ 31038696 (-)
coro2aa LOC103364489,LOC104937679 coding downstream 101224 30975555 ~ 31012392 (-)
fam13a fam13a coding upstream 5560 31125902 ~ 31202443 (-)
zgc:154142 LOC100690214,LOC102292599 coding upstream 82632 31202974 ~ 31226723 (-)
gprin3b gprin3,LOC105354446,LOC102782715,LOC101476885,LOC102210490,LOC106932517,LOC103144817,LOC106950628,LOC102231151 coding upstream 115312 31235654 ~ 31240412 (-)
ucp1 ucp1,LOC103364479 coding upstream 129005 31249347 ~ 31252531 (-)
tbc1d9 tbc1d9 coding upstream 142374 31262716 ~ 31287932 (-)
G8952 NA non-coding downstream 214458 30809371 ~ 30899158 (-)
G8890 NA non-coding downstream 414273 30699137 ~ 30699343 (-)
G8880 NA non-coding downstream 662930 30450331 ~ 30450686 (-)
G8843 NA non-coding downstream 758964 30354438 ~ 30354652 (-)
G8834 hadh,LOC103384097 non-coding downstream 840266 30271464 ~ 30273350 (-)
G9104 NA non-coding upstream 134744 31255086 ~ 31255294 (-)
G9106 NA non-coding upstream 136470 31256812 ~ 31257123 (-)
G9107 NA non-coding upstream 136839 31257181 ~ 31257383 (-)
G9108 NA non-coding upstream 137447 31257789 ~ 31258074 (-)
G9109 NA non-coding upstream 137989 31258331 ~ 31258547 (-)
G8975 NA other downstream 139004 30971388 ~ 30974612 (-)
bnc2 bnc2 other downstream 368738 30575872 ~ 30744878 (-)
G8701 NA other downstream 1519993 29589308 ~ 29593623 (-)
rnf24 rnf24,LOC102778784 other downstream 1773769 29306021 ~ 29339847 (-)
lonrf1l lonrf1,LOC103360493,LOC102797331 other downstream 3818705 27281798 ~ 27294911 (-)
znf827 znf827,LOC102789810 other upstream 814295 31934637 ~ 32006542 (-)
LOC120567365 NA other upstream 1101615 32221957 ~ 32226423 (-)
lrba NA other upstream 1464382 32584724 ~ 32781154 (-)
G9418 fbxw7,LOC104948758 other upstream 1972118 33092460 ~ 33134920 (-)
G9488 NA other upstream 2162736 33283078 ~ 33284080 (-)

Expression


Co-expression Network