G9322 (dclk2)


Basic Information

Item Value
gene id G9322
gene name dclk2
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 32573013 ~ 32573946 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU12557
CCCAATTTCAATGACTTGGTGCCATCTGGATACTCAAACACCAGCAAGTTCTCTGGTTTAATGTCTCTGTGGACGATGTTCGTGCTGTGCAGGTACTTTAGAGCTCCAGCGAGATTGTACACCATGACGCCAGCGTCTCTCTCAGTGTATTTGGCCGAGGAGGTGATGGCATCGAATAAATCCCCTCCCTTGACAAGCTCCATAACCAGGTAGAGCTCTGAGGGAGTGTCCACCTCCTCTATCAACATGATGATGTTGGGGTGTTTCACCTTCCGCAGCACTGCGACTTCATTCTCTATAAGGTGCTCCTGGAAACACACCAAGACAAATAATCCAAGTTACTGTATGTTCCAGTACACAGGATTGACACTGAGCCATTTATGCTAATAAAAAGACACTGCATTGTTTATATCGATTGAATGTGAATTTGTGTCAAGGGTATGTCATTCAGTGTGCGTCATTGTCAGTGTGTGAAGATTATTTCAGTTAGGTGATGAATAAAACATTACCAGCTTAATCTAACTGTGTGGGATAAGAggatcagagacacacacaggccacactagtgtgtgtgggtgtgtaaatAATGCAGTGCAATGCTGACATATGACCCTTCCTTAGGAGTGCGTGCATGTCTGAGCAATAGACAcaaagaagagagaaggagatggtgggggaaaaaagacaGAGTGAAACCTTTCCAGTGCACTTGGCCTTGTCGATGATCTTCAGTGCAAACTCTTTTCCTGTGGACCTGAACAGAA

Function

symbol description
dclk2 Predicted to enable ATP binding activity; microtubule binding activity; and protein serine/threonine kinase activity. Predicted to be involved in microtubule cytoskeleton organization. Predicted to act upstream of or within forebrain development; negative regulation of protein localization to nucleus; and peptidyl-serine phosphorylation. Predicted to be located in cytoplasm and cytoskeleton.

NR:

description
PREDICTED: serine/threonine-protein kinase DCLK2 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU12557 True 764 lncRNA 0.37 3 32573013 32573946

Neighbor

gene id symbol gene type direction distance location
nr3c2 nr3c2 coding downstream 92626 32395261 ~ 32480387 (-)
prmt9 prmt9 coding downstream 276448 32277856 ~ 32296565 (-)
si:dkey-27h10.2 NA coding downstream 806116 31739471 ~ 31766897 (-)
frem3 frem3 coding downstream 840926 31701755 ~ 31732087 (-)
usp38 usp38 coding downstream 881949 31682961 ~ 31691064 (-)
sh3d19 NA coding upstream 219663 32793609 ~ 32812276 (-)
gatb gatb,LOC102793371 coding upstream 271348 32845294 ~ 32864094 (-)
fbxw7 fbxw7 coding upstream 440477 33014423 ~ 33079079 (-)
tmem154 NA coding upstream 563565 33137511 ~ 33149554 (-)
march1 LOC103375917 coding upstream 586047 33159993 ~ 33205143 (-)
LOC120567382 NA non-coding downstream 440639 32083763 ~ 32132374 (-)
G9179 smarca5,LOC104965364 non-coding downstream 872713 31699716 ~ 31700300 (-)
G9123 NA non-coding downstream 1219665 31352559 ~ 31353348 (-)
G9111 znf330 non-coding downstream 1244704 31261992 ~ 31328309 (-)
G9110 NA non-coding downstream 1313995 31258786 ~ 31259018 (-)
G9370 rps3a,rs3a,LOC107695588 non-coding upstream 199258 32773204 ~ 32792497 (-)
G9392 NA non-coding upstream 263075 32837021 ~ 32839250 (-)
G9395 NA non-coding upstream 270726 32844672 ~ 32845053 (-)
G9487 NA non-coding upstream 708213 33282159 ~ 33282987 (-)
G9504 NA non-coding upstream 801921 33375867 ~ 33377238 (-)
LOC120567365 NA other downstream 346590 32221957 ~ 32226423 (-)
znf827 znf827,LOC102789810 other downstream 566471 31934637 ~ 32006542 (-)
G8975 NA other downstream 1598401 30971388 ~ 30974612 (-)
bnc2 bnc2 other downstream 1828135 30575872 ~ 30744878 (-)
G8701 NA other downstream 2979390 29589308 ~ 29593623 (-)
lrba NA other upstream 10778 32584724 ~ 32781154 (-)
G9418 fbxw7,LOC104948758 other upstream 518514 33092460 ~ 33134920 (-)
G9488 NA other upstream 709132 33283078 ~ 33284080 (-)
tapt1b tapt1,LOC104934196,LOC102290950 other upstream 732839 33306785 ~ 33364225 (-)
stox2a stox2,LOC100702551,LOC102293991,LOC101478850,LOC102775740 other upstream 923156 33497102 ~ 33525515 (-)

Expression


Co-expression Network