G9487



Basic Information


Item Value
gene id G9487
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 33282159 ~ 33282987 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU12773
GGATGTAGGCCTATAATTAGGTGTCTTGCCATTCTCAAAATCCGGCGTTTTCTTTTTTAGGGTGCAAATgtcccaccaaaacaagttccttccccggccgagactattttgcagaacTACCGTCGCTGCATCCGGCACTTAGCACCAAGACGATCGTGATTAGTTTAAAgcaatgcaaacaacccagagcgttttttttcttctatccaAGAATGCAattgtggtgtagccagacattactccacagcactgtggcgATCTGTCTGGAAGTGTGAAACTACACTGAGAGTGACCCCTTTCACATAACACATAATCATTCGCTCCATTGTCAATAAGATATTgataagtgcagctttaaagtcAGTAGCCTACACATCAGAGCTAACAAtggctacgtttacatgcacatcatTTTTGACCtaattccgaaaaagacgatattccgactaagctgtttacatggctaatgaaagtaaGTATTTTactaatattcctgtttacacatagccgtgcaaaacaggattttttcaaagtttaccagcggcggcggacttgttggaccgtgcgaacacagcctccctctttcattccttcaaccaccttcttgaaaaggtcggtgTAGTCATGTGTGCGAATATCCAAAAATCTGTTGATAACCAAGtctttgaaaatgtttaaaagttgctgttttttctccttcttattgggtctgcagccttgcaaactgttggctggttgttttttgtacagcaaccatagcaacgcacagagctgaccataagccgtaaacaggcaagaggccgtaaactgcggtaaaaacccagattga

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU12773 True 829 lncRNA 0.52 1 33282159 33282987

Neighbor


gene id symbol gene type direction distance location
uchl1 uchl1 coding downstream 6153 33269974 ~ 33276006 (-)
LOC120555481 LOC103365535,LOC100701197,LOC107090471,LOC102313089 coding downstream 14330 33235165 ~ 33267829 (-)
tmem192 tmem192 coding downstream 48836 33220371 ~ 33233323 (-)
march1 LOC103375917 coding downstream 77016 33159993 ~ 33205143 (-)
tmem154 NA coding downstream 132605 33137511 ~ 33149554 (-)
LOC120562840 NA coding upstream 24775 33307762 ~ 33310033 (-)
fgfbp2b fgfbp2 coding upstream 30747 33313734 ~ 33315301 (-)
prom1b NA coding upstream 36383 33319370 ~ 33349752 (-)
casp3a LOC103370277 coding upstream 245432 33528419 ~ 33535056 (-)
LOC120564990 LOC104967107,LOC102294790,LOC103370278 coding upstream 256596 33539583 ~ 33547383 (-)
G9395 NA non-coding downstream 437106 32844672 ~ 32845053 (-)
G9392 NA non-coding downstream 442909 32837021 ~ 32839250 (-)
G9370 rps3a,rs3a,LOC107695588 non-coding downstream 489662 32773204 ~ 32792497 (-)
G9322 dclk2 non-coding downstream 708213 32573013 ~ 32573946 (-)
LOC120567382 NA non-coding downstream 1149785 32083763 ~ 32132374 (-)
G9504 NA non-coding upstream 92880 33375867 ~ 33377238 (-)
G9538 cpe non-coding upstream 123663 33406650 ~ 33422237 (-)
G9537 NA non-coding upstream 126535 33409522 ~ 33426000 (-)
G9540 cpe non-coding upstream 139818 33422805 ~ 33423722 (-)
G9565 NA non-coding upstream 243561 33526548 ~ 33526787 (-)
G9418 fbxw7,LOC104948758 other downstream 147239 33092460 ~ 33134920 (-)
lrba NA other downstream 501005 32584724 ~ 32781154 (-)
LOC120567365 NA other downstream 1055736 32221957 ~ 32226423 (-)
znf827 znf827,LOC102789810 other downstream 1275617 31934637 ~ 32006542 (-)
G8975 NA other downstream 2307547 30971388 ~ 30974612 (-)
G9488 NA other upstream 91 33283078 ~ 33284080 (-)
tapt1b tapt1,LOC104934196,LOC102290950 other upstream 23798 33306785 ~ 33364225 (-)
stox2a stox2,LOC100702551,LOC102293991,LOC101478850,LOC102775740 other upstream 214115 33497102 ~ 33525515 (-)
G9740 NA other upstream 1169863 34452850 ~ 34457635 (-)
G9997 NA other upstream 2115653 35398640 ~ 35400474 (-)

Expression



Co-expression Network