LOC120574930 (LOC103372508,LOC108249786,LOC103470876,LOC102234899)


Basic Information

Item Value
gene id LOC120574930
gene name LOC103372508,LOC108249786,LOC103470876,LOC102234899
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 233044 ~ 246973 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU128
CAGATCCTGGGCTTCAACAGCAAAGGAGAGGTGGTGAACTACAGCGAGTCCCGGACGGCCGAGGAGATCTGCGAGAGCTCCTCCAAGATGATCACCTTCATCGACCTGGCCGGACACCACAAGTACCTGAAGACCACCATCTTCGGCCTCACCAGCTACTGCCCCGACTTCGCCATGCTGGTGGTGAGCGCCAACACCGGCATCGCCGGTACGACCCGGGAGCACCTGGGCCTGGCCATGGCGCTCAAAGTCCCCATCTTCATCGTGGTCAGCAAAGTGGACCTGTGCTCCCGCGGCACCGTGGACAGAACCGTGCGCCAGCTGGAGCGCGTCCTGAAGCAGCCGGGCTGCAACAAGGTGCCCATGGTGGTGTCCACGCCCGACGACGCCGTGACCGCCGCGCAGCAGTTCGCCCAGTCCGCCTGcaTCACACCTATCTTCACCCTGTCCAGTGTGTCTGGAGAGAGTCTGGACCTGCTGAAGGTTTTCTTGAACATCCTCCCTCCGCTGAGCAACAGCaaggagcaggaggagctgATGCAGCAGCTCACCGAGttccaggtgGATGAGATCTACTCTGTTCCTGACGTGGGGACCGTGGTTGGAGGAACTCTGTACAGCGGTGTGTGCAGGGAGGGCGAGCGGCTGGTGGTGGGTCCGACCGATGAGGGCCGGTTCCTGCGTCTGAAGGTGGGCAGCATCCAGAGGAACCGCTCGGCCTGCCGGGTGCTGAGGGCCGGCCAGGCCGCCACGCTCGCCCTGGGCGCCTTCGACCGCTCGCTGCTGCGCAAGGGCATGGTGATGGTCAGCCCCAAGATGAACCCGACCATCTGCTGTCAGTTTGAAGCCGCCATCGTGCTGCTCTTCCACGCCAAGACCTTCCGCCGCGGGTCGCAGGTCACCGTGCACGTGGGCAACGTCCGGCAGACGGCCACGGCCGAGTGCCTCCACGGGAAGG
>XM_039825843.1
ATCCTGGGCTTCAACAGCAAAGGAGAGGTGGTGAACTACAGCGAGTCCCGGACGGCCGAGGAGATCTGCGAGAGCTCCTCCAAGATGATCACCTTCATCGACCTGGCCGGACACCACAAGTACCTGAAGACCACCATCTTCGGCCTCACCAGCTACTGCCCCGACTTCGCCATGCTGGTGGTGAGCGCCAACACCGGCATCGCCGGTACGACCCGGGAGCACCTGGGCCTGGCCATGGCGCTCAAAGTCCCCATCTTCATCGTGGTCAGCAAAGTGGACCTGTGCTCCCGCGGCACCGTGGACAGAACCGTGCGCCAGCTGGAGCGCGTCCTGAAGCAGCCGGGCTGCAACAAGGTGCCCATGGTGGTGTCCACGCCCGACGACGCCGTGACCGCCGCGCAGCAGTTCGCCCAGTCCGCCTGcaTCACACCTATCTTCACCCTGTCCAGTGTGTCTGGAGAGAGTCTGGACCTGCTGAAGGTTTTCTTGAACATCCTCCCTCCGCTGAGCAACAGCaaggagcaggaggagctgATGCAGCAGCTCACCGAGttccaggtgGATGAGATCTACTCTGTTCCTGACGTGGGGACCGTGGTTGGAGGAACTCTGTACAGCGGTGTGTGCAGGGAGGGCGAGCGGCTGGTGGTGGGTCCGACCGATGAGGGCCGGTTCCTGCGTCTGAAGGTGGGCAGCATCCAGAGGAACCGCTCGGCCTGCCGGGTGCTGAGGGCCGGCCAGGCCGCCACGCTCGCCCTGGGCGCCTTCGACCGCTCGCTGCTGCGCAAGGGCATGGTGATGGTCAGCCCCAAGATGAACCCGACCATCTGCTGTCAGTTTGAAGCCGCCATCGTGCTGCTCTTCCACGCCAAGACCTTCCGCCGCGGGTCGCAGGTCACCGTGCACGTGGGCAACGTCCGGCAGACGGCCACGGCCGAGTGCCTCCACGGGAAGGTCGGTTCACAGCACGGACGCAGCTCGCCGTCACTGACATCACTGGTTAACGTCCTGGATCAATGGACGACTTGTCTGGTCTCTAAACTGTGGATCTagaaacatattcacatttaacacgctgacatcacacaagttcaCCTGTTTTATCATCAAAACTTACTTTTATTATTACGGATTAATCAGTTATCAGAAGACTACTAACAGCTCTAGTTTATAGATGATTTAAAATATGTGATCGCCATCTTGTGGCTGCTTCGTGTAACTCCacgtgactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgtattgtgtgtgtgtctct

Function

NR:

description
PREDICTED: GTP-binding protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU128 False 958 TUCP 0.40 7 233384 246973
XM_039825843.1 True 1295 mRNA 0.58 7 233044 246970

Neighbor

gene id symbol gene type direction distance location
LOC120564633 NA coding downstream 124052 108587 ~ 108992 (-)
LOC120560139 gtdc1 coding upstream 7827 254800 ~ 270538 (-)
LOC120560232 LOC103372506 coding upstream 30507 277480 ~ 306630 (-)
LOC120560351 NA coding upstream 72709 319682 ~ 330033 (-)
tbce NA coding upstream 157884 404857 ~ 429984 (-)
LOC120566769 NA coding upstream 325791 572764 ~ 577992 (-)
G72 NA non-coding downstream 11609 124212 ~ 221435 (-)
G74 NA non-coding downstream 18713 158014 ~ 214331 (-)
LOC120567455 NA non-coding downstream 24252 208293 ~ 208792 (-)
G78 NA non-coding downstream 50220 164668 ~ 182824 (-)
G79 NA non-coding downstream 83834 148591 ~ 149210 (-)
G111 NA non-coding upstream 20659 267632 ~ 268377 (-)
G114 NA non-coding upstream 26636 273609 ~ 275130 (-)
G80 NA non-coding upstream 29834 276807 ~ 328685 (-)
G81 NA non-coding upstream 47550 294523 ~ 294846 (-)
G68 NA non-coding upstream 68734 315707 ~ 317133 (-)
G65 NA other downstream 1111 227526 ~ 231933 (-)
LOC120567035 NA other downstream 75806 154328 ~ 157238 (-)
G63 NA other downstream 78818 151749 ~ 154226 (-)
G413 NA other upstream 191684 438657 ~ 439448 (-)
G516 myhz1.2,LOC106938366,LOC104959125 other upstream 638376 885349 ~ 886343 (-)
G519 NA other upstream 719263 966236 ~ 974827 (-)
G565 LOC105912973,LOC105893694,LOC105900140,LOC105893089 other upstream 1112691 1359664 ~ 1360473 (-)
stab2 NA other upstream 1223444 1470417 ~ 1576495 (-)

Expression


Co-expression Network