G941


Basic Information

Item Value
gene id G941
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 2904336 ~ 2910703 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU1284
gggtctgggaactcaccattggcaacGCTAGCTGGTAGATtaaatcacaggactctaatgctgtaaatcacaggactctaatgctgtaaatcacaggactctaacactgtaaatcacaggactctaacactgtaaatcacaggactctaatGCTTTAAATCATCACAGGACTAacgctgtaaatcacaggactaaCGCTGTAAATCATCACAGAACTCTAATGCTGTAAATCATCACAGAACTCTAATGCTGTAAATCATCACAGGACTCTAatgctgtaaatcacaggactaacgctgtaaatcatcacaggactctaatgctgtaaatcacaggactctaatGCTGTAAATCATCACCGGACTCTaacactgtaaatcacaggactctaacgctgtaaatcacaggactctaacactgtaaatcacaggactctaacactgtaaatcacaggactctaacactgtaaatcacaggactctaacgctgtaaatcacaggacgctaacgctgtaaatcacaggactaacgctgtaaatcacaggactctaacgctgtaaatcacaggacgctaacgctgtaaatcacaggactaacgctgtaaatcacaggactaacgctgtaaatcacaggactaaCACTGGGACAGTCAGCGAGAAACTGCTGCTGCCGTTAACACGatgaacagagaggagaaaaCTGTAGAACTACATCACGATGAACTACAACTCAGTCAGACGCTACATGCTGCACTAACCTTCACATCTGCACATTACACAAATGATATTAGTTACATTCTGAACCCATTCAGCCTCTTATTCTCAtgcaaaacttttattttgtattgtaattattgtttatttcatatgaaTTTTTAATacgtttgtttatgtatgcaccaatcacCACGTACTGTAGATATTatttattgtggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1284 True 934 lncRNA 0.49 2 2904336 2910703

Neighbor

gene id symbol gene type direction distance location
eif4a3 eif4a3 coding upstream 13331 2882923 ~ 2891005 (+)
LOC120561808 srf,LOC103372093 coding upstream 23216 2858504 ~ 2881120 (+)
LOC120566159 NA coding upstream 320074 2572980 ~ 2584262 (+)
LOC120561353 LOC102083160 coding upstream 510049 2362732 ~ 2394287 (+)
mrps28 mrps28 coding upstream 636713 2266855 ~ 2267623 (+)
tmem178 tmem178a,LOC102307988 coding downstream 27394 2938097 ~ 2977429 (+)
LOC120557776 NA coding downstream 198888 3109591 ~ 3128050 (+)
LOC120557788 LOC100703858,LOC102778772,LOC103375691,LOC101465362,LOC107082671 coding downstream 246500 3157203 ~ 3159292 (+)
LOC120550686 LOC106676715 coding downstream 454113 3364816 ~ 3373141 (+)
rrbp1b NA coding downstream 502722 3413425 ~ 3448493 (+)
G936 NA non-coding upstream 27229 2875574 ~ 2877107 (+)
G937 NA non-coding upstream 37573 2864957 ~ 2866763 (+)
G884 NA non-coding upstream 204259 2697529 ~ 2700077 (+)
G886 NA non-coding upstream 208946 2694227 ~ 2695390 (+)
LOC120566193 NA non-coding upstream 234581 2658402 ~ 2669755 (+)
G954 NA non-coding downstream 28652 2939355 ~ 2939795 (+)
G956 NA non-coding downstream 29988 2940691 ~ 2940972 (+)
G953 NA non-coding downstream 69730 2980433 ~ 2982716 (+)
G960 NA non-coding downstream 72556 2983259 ~ 2991670 (+)
G968 NA non-coding downstream 78250 2988953 ~ 2989599 (+)
G879 NA other upstream 203361 2626243 ~ 2700975 (+)
LOC120566146 LOC107082675,LOC108251143,LOC103383281 other upstream 333882 2558876 ~ 2570454 (+)
G714 LOC103375176,LOC105920176,LOC100706186,LOC101468385 other upstream 558288 2307285 ~ 2346048 (+)
LOC120566000 NA other upstream 937081 1946145 ~ 1967255 (+)
LOC120566853 snrpb2,LOC102212107,LOC102301910,LOC101474810 other upstream 1067876 1746571 ~ 1836460 (+)
LOC120567073 sos1 other downstream 84326 2995029 ~ 3080190 (+)
LOC120567079 NA other downstream 157695 3068398 ~ 3071473 (+)
LOC120557752 LOC104935435,LOC108250455,LOC106524354,LOC101471560,LOC103371946,LOC102291612 other downstream 217386 3128089 ~ 3157138 (+)
dzank1 NA other downstream 264898 3175601 ~ 3259758 (+)
LOC120555387 LOC106675676,LOC106675675 other downstream 557421 3468124 ~ 3480130 (+)

Expression


Co-expression Network