LOC120572869


Basic Information

Item Value
gene id LOC120572869
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 35584470 ~ 35586613 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU13574
CTGCCATACAACAAAACCAGGGTCTCTGCTGCAAAATACAGCCAAGAGCAGGACtgagctgcagacagacaggggcaGGTCAGGGGGCTGTTGGTGTACAAGTCGGCCAGTCACGCAAACATTTCTTTGCTTATATTATTTGGGTTGGATTTGTCTGTGTTGTGCTATATCTCGAATGATGGCCAGCAACAAGGAGACCAGACCGCTTGATACCATGACAGTAGCTGCCCCAGAGGAAACTCAGGGTGATAATGATACAAGGTCCagacagaaaaaagaagagaaactgaTCGTGACAGCCTGGCAAAGCATGTCCTCAGCTCTGCGGCAGCTCAGTCTGTGTAAGGACTCCAGAGCTCCAGGCCCGGCTCAGTCTTTCCTGGCCAAGCAGAGGCAATCCACCCAGGCCAGGAGGGCGCTCTCCCCCCGGCTGCAGCCCAGGTAGGAGCCTCCATCGGCAGGGAGAAATGGAGGAGTGCAGCCCACTCATGGGCATGATGAAAAGCAAGATTGTGGAAGGTGTGAATTTCTTCGAGTCACCGTCTGTGCTCTATTTGGTTGGCTGCTATCGCCCCCTGCTGGTCATTGTTGGAACTGAAGTGATATTTGTGACTTGATATAATATCTAGTAGTGTCATAAAttagttttcttttagttttataCCTAAATGTGTGCTTGTCAATAATCACCAGAGTATCTGCTCCATTTATCATTGTAtaatatttatacatttatttgtgCAGGTGAGATTCAATTTCCTTTAGAAATAATGCAAAACATTGACTATTCATTTTGTCATTAATGTTAGACGGTTATGTTATCTCATTCATTTAATtcaatatttgttttaaattaagcTTTAGAATACAACAGATAATACATTAGAAAGCATTCTATTTAAAGGGACATTTTATTaatcaaagaaaataaagtaaacaaaGAAAATTGTCACCTATTGTGTCTGTTCATTTTAGCACCATTTGTTCAGTCCAAACTTTTGTTAATCCTCTCTACTAGACTTCAGTAAACAtaggcaatatattgatattctaCAAAATAATGTGCAGATCATTTTTCCTTTAAACACACTCtttgattttaataaacaattggtCTCCGTTTCATCTCCTCTGTATACATGTAGTTTTAAAaggtttagcctagcttagcaccaAGACTGAAAGGACGGGTAAAC
>XM_039822414.1
GCCTGCAGGACCTCTCCATATTGTTCTGTGTCTGCCATACAACAAAACCAGGGTCTCTGCTGCAAAATACAGCCAAGAGCAGGACtgagctgcagacagacaggggcaGGTCAGGGGGCTGTTGGTGTACAAGTCGGCCAGTCACGCAAACATTTCTTTGCTTATATTATTTGGGTTGGATTTGTCTGTGTTGTGCTATATCTCGAATGATGGCCAGCAACAAGGAGACCAGACCGCTTGATACCATGACAGTAGCTGCCCCAGAGGAAACTCAGGGTGATAATGATACAAGGTCCagacagaaaaaagaagagaaactgaTCGTGACAGCCTGGCAAAGCATGTCCTCAGCTCTGCGGCAGCTCAGTCTGTGTAAGGACTCCAGAGCTCCAGGCCCGGCTCAGTCTTTCCTGGCCAAGCAGAGGCAATCCACCCAGGCCAGGAGGGCGCTCTCCCCCCGGCTGCAGCCCAGGTAGGAGCCTCCATCGGCAGGGAGAAATGGAGGAGTGCAGCCCACTCATGGGCATGATGAAAAGCAAGATTGTGGAAGGTGTGAATTTCTTCGAGTCACCGTCTGTGCTCTATTTGGTTGGCTGCTATCGCCCCCTGCTGGTCATTGTTGGAACTGAAGTGATATTTGTGACTTGATATAATATCTAGTAGTGTCATAAAttagttttcttttagttttataCCTAAATGTGTGCTTGTCAATAATCACCAGAGTATCTGCTCCATTTATCATTGTAtaatatttatacatttatttgtgCAGGTGAGATTCAATTTCCTTTAGAAATAATGCAAAACATTGACTATTCATTTTGTCATTAATGTTAGACGGTTATGTTATCTCATTCATTTAATtcaatatttgttttaaattaagcTTTAGAATACAACAGATAATACATTAGAAAGCATTCTATTTAAAGGGACATTTTATTaatcaaagaaaataaagtaaacaaaGAAAATTGTCACCTATTGTGTCTGTTCATTTTAGCACCATTTGTTCAGTCCAAACTTTTGTTAATCCTCTCTACTAGACTTCAGTAAACAtaggcaatatattgatattctaCAAAATAATGTGCAGATCATTTTTCCTTTAAACACACTCtttgattttaataaacaattggtCTCCGTTTCA

Function

GO:

id name namespace
GO:0005198 structural molecule activity molecular_function
GO:0005212 structural constituent of eye lens molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13574 True 1196 TUCP 0.41 3 35584470 35586582
XM_039822414.1 False 1156 mRNA 0.41 3 35584541 35586613

Neighbor

gene id symbol gene type direction distance location
grk4 grk4 coding downstream 42387 35493057 ~ 35542083 (-)
htt htt coding downstream 92111 35456939 ~ 35492359 (-)
LOC120569607 NA coding downstream 107110 35477231 ~ 35477360 (-)
dok7b LOC103354519,LOC104946983,LOC107393269,LOC102790269 coding downstream 185952 35372017 ~ 35398518 (-)
adra2c LOC104953545,LOC103354520,LOC103384182 coding downstream 364094 35216837 ~ 35220376 (-)
prdx2 prdx2,LOC106526939 coding upstream 37291 35623904 ~ 35628892 (-)
LOC120555967 NA coding upstream 101876 35688489 ~ 35691028 (-)
LOC120564231 LOC103355955,LOC104967895 coding upstream 146355 35732968 ~ 35739670 (-)
nfil3-5 NA coding upstream 229159 35815772 ~ 35825168 (-)
LOC120563277 NA coding upstream 242142 35828755 ~ 35831299 (-)
G10063 NA non-coding downstream 11026 35562913 ~ 35573444 (-)
G10061 NA non-coding downstream 26312 35557548 ~ 35558158 (-)
G9993 NA non-coding downstream 179821 35403414 ~ 35404649 (-)
G9967 NA non-coding downstream 312418 35263045 ~ 35272052 (-)
G9874 LOC104951083 non-coding downstream 736984 34847157 ~ 34847486 (-)
G10091 NA non-coding upstream 65359 35651972 ~ 35652171 (-)
G10143 NA non-coding upstream 112019 35698632 ~ 35702592 (-)
G10174 NA non-coding upstream 213008 35799621 ~ 35843137 (-)
G10198 NA non-coding upstream 334242 35920855 ~ 35921076 (-)
G10200 NA non-coding upstream 342136 35928749 ~ 35929260 (-)
rgs12b rgs12,LOC104946104 other downstream 133259 35404815 ~ 35451211 (-)
G9997 NA other downstream 183996 35398640 ~ 35400474 (-)
G9740 NA other downstream 1126835 34452850 ~ 34457635 (-)
stox2a stox2,LOC100702551,LOC102293991,LOC101478850,LOC102775740 other downstream 2058955 33497102 ~ 33525515 (-)
tapt1b tapt1,LOC104934196,LOC102290950 other downstream 2220245 33306785 ~ 33364225 (-)
micall1a LOC100693188 other upstream 357435 35944048 ~ 35969266 (-)
slc5a10 slc5a10,LOC102791530,LOC103460715 other upstream 646594 36233207 ~ 36256880 (-)
LOC120547992 NA other upstream 690241 36276854 ~ 36280814 (-)
LOC120561459 LOC103359169,LOC107395760 other upstream 743168 36329781 ~ 36337148 (-)
LOC120560464 kcnq5,LOC100711684,LOC102297355 other upstream 937658 36524271 ~ 36718918 (-)

Expression


Co-expression Network