G11085


Basic Information

Item Value
gene id G11085
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 39046412 ~ 39086916 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU14945
acacatctgttactaacccctaggttcgttttgcgctggaattgtcctttagttttgacttaaagatattaattttcactgtaaatgcatatcggttccaggTATGTTTCgttaactactaataattgcTATTGGCCTTGAAAAACCTGTATCTGTCGATCCCTACAACATTTACTACAGTTTCAATGAAATATTTTGATTTAAATATATacactaccagtcaaaagtttggggtcattccactccattatagacagaataccagctgagatcagttgcattgttttttttaaccagggcagcagttttcagattacattatgtgtttacataattgcaaaagggttctccaatgttttctcagttagccttttaaaatgatatcagattagtaaacagaatgggcctttggaacattggatgaatggttgctgataatgggcaatgtagatattgcattaaagatcagccacttctttctacaacagtcgagaacccttttgcaattatgtaagaacataatgtaatctgaaaactgctgtagaaagaagtggctgatctttaatgcaatatctacattgcccattatcagcaaccattcatccaatgttccaaaggcccattctgtttactaatctgatatcattttaaaaggctaactgagaaaacattggagaaccttttgcaattatgtaaacacataatgtaatctgaaaactgctgccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14945 True 726 lncRNA 0.35 2 39046412 39086916

Neighbor

gene id symbol gene type direction distance location
LOC120560082 NA coding upstream 4310 39014527 ~ 39042102 (+)
mgarpb mgarp coding upstream 32357 38994548 ~ 39014055 (+)
LOC120568555 LOC104956419 coding upstream 55329 38985704 ~ 38991083 (+)
naa15b naa15,LOC103374325,LOC102289356,LOC103132842 coding upstream 66789 38960088 ~ 38979623 (+)
clgn NA coding upstream 283822 38749513 ~ 38762590 (+)
ctnnd1 NA coding downstream 5791 39092707 ~ 39122137 (+)
LOC120561483 NA coding downstream 35346 39122262 ~ 39134797 (+)
unc93b1 unc93b1 coding downstream 52132 39139048 ~ 39158576 (+)
crybb1l2 LOC103367194,LOC104959277,LOC102785008,LOC100705765,LOC101465018,LOC102201138 coding downstream 88546 39175462 ~ 39180779 (+)
rtn4rl2a LOC105931531,LOC102236583,LOC101165034,LOC106946179 coding downstream 130991 39217907 ~ 39221518 (+)
G11024 NA non-coding upstream 272457 38773712 ~ 38773955 (+)
G11016 NA non-coding upstream 274131 38771957 ~ 38772281 (+)
G11014 NA non-coding upstream 277565 38768540 ~ 38768847 (+)
G11008 NA non-coding upstream 297843 38747380 ~ 38748569 (+)
G11007 NA non-coding upstream 299154 38746042 ~ 38747258 (+)
G11108 LOC102201438,LOC102785297,LOC101464735,LOC102294431,LOC100705502 non-coding downstream 74377 39161293 ~ 39169558 (+)
G11119 LOC104954021,LOC103368622,LOC102787350,LOC102202699,LOC100696537 non-coding downstream 203400 39290316 ~ 39290976 (+)
G11130 NA non-coding downstream 301322 39388238 ~ 39388577 (+)
G11132 NA non-coding downstream 310543 39397459 ~ 39398157 (+)
G11133 NA non-coding downstream 311955 39398871 ~ 39399928 (+)
maml3 maml3 other upstream 108919 38808938 ~ 38937493 (+)
LOC120568144 LOC101471605 other upstream 776133 38244440 ~ 38270279 (+)
G10844 c1h17orf67,clg6h17orf67,LOC107395727,LOC101476916 other upstream 1023980 37978432 ~ 38022432 (+)
G10590 p4hb,LOC102795492 other upstream 1632256 37336127 ~ 37414156 (+)
anapc11 anapc11,LOC107553313,LOC106564932,LOC108248224 other upstream 1717223 37325983 ~ 37329189 (+)
timm10 timm10 other downstream 47971 39134887 ~ 39138402 (+)
G11245 NA other downstream 771597 39858513 ~ 39859104 (+)
G11246 NA other downstream 772781 39859697 ~ 39860083 (+)
zgc:195282 LOC103464269 other downstream 1986844 41073760 ~ 41077351 (+)
LOC120569480 NA other downstream 3155915 42242831 ~ 42251488 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_024495 NA non-coding NC_007136.7 CM002909.2 9450600 ~ 9651940 (-)
grasscarp (Ctenopharyngodon idella) CI01000001_11898621_11898914 NA coding CI01000001 null 11898297 ~ 11900188 (+)