G12559


Basic Information

Item Value
gene id G12559
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 46472678 ~ 46472913 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU16768
taggagaccataaggaacagtgtgaaataccctatataatcattctatcacccctttaaaggtacaatatgtaacatttctgctttaaaatgtctaaaaacgaccatacctatgttatatatttttatgagttgtgttcttacactatcccaaatgtttccaccaaatgtcaaacccagagaaatctgttattttattttcagacacgggacgtttcctttagtcgcccgtcattG

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process

KEGG:

id description
ko00830 Retinol metabolism
ko00980 Metabolism of xenobiotics by cytochrome P450
ko00982 Drug metabolism - cytochrome P450
ko00983 Drug metabolism - other enzymes
ko05204 Chemical carcinogenesis - DNA adducts

RNA

RNA id representative length rna type GC content exon number start site end site
TU16768 True 236 lncRNA 0.35 1 46472678 46472913

Neighbor

gene id symbol gene type direction distance location
si:ch73-6k14.2 NA coding upstream 71313 46392846 ~ 46401365 (+)
LOC120562127 NA coding upstream 98838 46346970 ~ 46373840 (+)
LOC120557716 LOC104930044,LOC103368287,LOC102204811,LOC102301891 coding upstream 135345 46318376 ~ 46337333 (+)
gstt1b NA coding upstream 371351 46080099 ~ 46101327 (+)
ddt ddt,LOC103368817,LOC104931754,LOC108247357 coding upstream 393659 46068792 ~ 46079019 (+)
LOC120543662 NA coding downstream 1727957 48200870 ~ 48202754 (+)
neurl1aa LOC108246381,LOC103355274,LOC104926624,LOC102796982,LOC101477033,LOC102303708,LOC100693641 coding downstream 1741391 48214304 ~ 48320857 (+)
LOC120564817 slc24a3,LOC100695245 coding downstream 2024552 48497465 ~ 48609279 (+)
LOC120556912 rin2 coding downstream 2138366 48611279 ~ 48704119 (+)
LOC120556923 NA coding downstream 2241564 48714477 ~ 48721252 (+)
G12537 NA non-coding upstream 181610 46290741 ~ 46291068 (+)
LOC120557712 NA non-coding upstream 187199 46283048 ~ 46285479 (+)
G12522 NA non-coding upstream 203652 46268812 ~ 46269026 (+)
G12485 NA non-coding upstream 306930 46165530 ~ 46165748 (+)
G12484 NA non-coding upstream 308283 46164192 ~ 46164395 (+)
G12566 NA non-coding downstream 8268 46481181 ~ 46481459 (+)
G12568 NA non-coding downstream 34151 46507064 ~ 46507393 (+)
LOC120567408 osbpl5 non-coding downstream 45302 46518215 ~ 46522032 (+)
G12575 NA non-coding downstream 71291 46544204 ~ 46544441 (+)
G12576 NA non-coding downstream 83679 46556592 ~ 46557099 (+)
G12553 NA other upstream 54905 46416428 ~ 46417773 (+)
trnak-uuu_1 NA other upstream 264953 46207653 ~ 46207725 (+)
trnat-ugu NA other upstream 265674 46206932 ~ 46207004 (+)
G12491 NA other upstream 302989 46166405 ~ 46169689 (+)
trnae-cuc NA other upstream 308125 46164482 ~ 46164553 (+)
LOC120564084 LOC100694180 other downstream 373104 46846017 ~ 47125487 (+)
G12872 NA other downstream 1955887 48428800 ~ 48488219 (+)
G12873 NA other downstream 2012335 48485248 ~ 48486493 (+)

Expression


Co-expression Network