G12568


Basic Information

Item Value
gene id G12568
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 46507064 ~ 46507393 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU16777
accactttagtactgagccagaaagaccaacccagttttccaatcggtcaagcaatatgtcatggtctaccgtatcaaatgcagcactgagatcaagtaatactaagactgaaattttgccactatctgtgtttaagtggatgtcattaaagactttaacaagagccgtctcagtgctgtggtgtggtcgaaaacctgactggaaggcatcaaaactgttgtttaacgataagaaaaggttgagttgttgaaaaaccactttttctatgattttacttaaaaatggaaggtttgatattggcctatagttgctcattagtgtcgtgtcta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU16777 True 330 lncRNA 0.38 1 46507064 46507393

Neighbor

gene id symbol gene type direction distance location
si:ch73-6k14.2 NA coding upstream 105699 46392846 ~ 46401365 (+)
LOC120562127 NA coding upstream 133224 46346970 ~ 46373840 (+)
LOC120557716 LOC104930044,LOC103368287,LOC102204811,LOC102301891 coding upstream 169731 46318376 ~ 46337333 (+)
gstt1b NA coding upstream 405737 46080099 ~ 46101327 (+)
ddt ddt,LOC103368817,LOC104931754,LOC108247357 coding upstream 428045 46068792 ~ 46079019 (+)
LOC120543662 NA coding downstream 1693477 48200870 ~ 48202754 (+)
neurl1aa LOC108246381,LOC103355274,LOC104926624,LOC102796982,LOC101477033,LOC102303708,LOC100693641 coding downstream 1706911 48214304 ~ 48320857 (+)
LOC120564817 slc24a3,LOC100695245 coding downstream 1990072 48497465 ~ 48609279 (+)
LOC120556912 rin2 coding downstream 2103886 48611279 ~ 48704119 (+)
LOC120556923 NA coding downstream 2207084 48714477 ~ 48721252 (+)
G12566 NA non-coding upstream 25605 46481181 ~ 46481459 (+)
G12559 NA non-coding upstream 34151 46472678 ~ 46472913 (+)
G12537 NA non-coding upstream 215996 46290741 ~ 46291068 (+)
LOC120557712 NA non-coding upstream 221585 46283048 ~ 46285479 (+)
G12522 NA non-coding upstream 238038 46268812 ~ 46269026 (+)
LOC120567408 osbpl5 non-coding downstream 10822 46518215 ~ 46522032 (+)
G12575 NA non-coding downstream 36811 46544204 ~ 46544441 (+)
G12576 NA non-coding downstream 49199 46556592 ~ 46557099 (+)
LOC120562979 NA non-coding downstream 105886 46613279 ~ 46614741 (+)
G12592 NA non-coding downstream 107530 46614923 ~ 46615279 (+)
G12553 NA other upstream 89291 46416428 ~ 46417773 (+)
trnak-uuu_1 NA other upstream 299339 46207653 ~ 46207725 (+)
trnat-ugu NA other upstream 300060 46206932 ~ 46207004 (+)
G12491 NA other upstream 337375 46166405 ~ 46169689 (+)
trnae-cuc NA other upstream 342511 46164482 ~ 46164553 (+)
LOC120564084 LOC100694180 other downstream 338624 46846017 ~ 47125487 (+)
G12872 NA other downstream 1921407 48428800 ~ 48488219 (+)
G12873 NA other downstream 1977855 48485248 ~ 48486493 (+)

Expression


Co-expression Network