G12676


Basic Information

Item Value
gene id G12676
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 47226967 ~ 47227207 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU16892
GTTCCTTCGACCTCATGATTCTCATTTGCTCTGACATgcactgtgagctgtaaggtcttatatagacaggtgtgtgcctttcctaatcaagtccaatcagtttaattaaacacagcaggactccaatgaaggagtagaaccatctcaaggaggatcagaagaaatggacagcatgtgagttaaatatgagtgtcacagcaaagggtctgaatacttatggccatgtgatatttcagttttt

Function

GO:

id name namespace
GO:1990234 transferase complex cellular_component
GO:1902494 catalytic complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU16892 True 241 lncRNA 0.50 1 47226967 47227207

Neighbor

gene id symbol gene type direction distance location
si:ch73-6k14.2 NA coding upstream 825602 46392846 ~ 46401365 (+)
LOC120562127 NA coding upstream 853127 46346970 ~ 46373840 (+)
LOC120557716 LOC104930044,LOC103368287,LOC102204811,LOC102301891 coding upstream 889634 46318376 ~ 46337333 (+)
gstt1b NA coding upstream 1125640 46080099 ~ 46101327 (+)
ddt ddt,LOC103368817,LOC104931754,LOC108247357 coding upstream 1147948 46068792 ~ 46079019 (+)
LOC120543662 NA coding downstream 973663 48200870 ~ 48202754 (+)
neurl1aa LOC108246381,LOC103355274,LOC104926624,LOC102796982,LOC101477033,LOC102303708,LOC100693641 coding downstream 987097 48214304 ~ 48320857 (+)
LOC120564817 slc24a3,LOC100695245 coding downstream 1270258 48497465 ~ 48609279 (+)
LOC120556912 rin2 coding downstream 1384072 48611279 ~ 48704119 (+)
LOC120556923 NA coding downstream 1487270 48714477 ~ 48721252 (+)
G12674 NA non-coding upstream 30381 47196386 ~ 47196586 (+)
G12673 NA non-coding upstream 42419 47184219 ~ 47184548 (+)
G12625 NA non-coding upstream 99627 47126345 ~ 47127340 (+)
G12639 NA non-coding upstream 105450 47121216 ~ 47121517 (+)
G12636 NA non-coding upstream 123136 47103565 ~ 47103831 (+)
G12701 NA non-coding downstream 304614 47531821 ~ 47532034 (+)
G12703 NA non-coding downstream 337981 47565188 ~ 47565503 (+)
G12708 NA non-coding downstream 408064 47635271 ~ 47635617 (+)
G12709 NA non-coding downstream 442078 47669285 ~ 47669679 (+)
LOC120544411 NA non-coding downstream 499453 47726660 ~ 47728050 (+)
LOC120564084 LOC100694180 other upstream 101480 46846017 ~ 47125487 (+)
G12553 NA other upstream 809194 46416428 ~ 46417773 (+)
trnak-uuu_1 NA other upstream 1019242 46207653 ~ 46207725 (+)
trnat-ugu NA other upstream 1019963 46206932 ~ 46207004 (+)
G12491 NA other upstream 1057278 46166405 ~ 46169689 (+)
G12872 NA other downstream 1201593 48428800 ~ 48488219 (+)
G12873 NA other downstream 1258041 48485248 ~ 48486493 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G92085 NA non-coding NC_048565.1 CM023219.2 81361969 ~ 81370232 (-)