G12778


Basic Information

Item Value
gene id G12778
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 47943938 ~ 47944362 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU17008
tgaagtctcttttatataggccttagtggtcccctaatactgtatctgaagtctcttttatatagaccttagtggtcccctaatactgtatctgaagtttattttatttagaccttagtggtcccctaatactgtatctgaagtctcttttatatagaccttagtggtcccctaatactgtatctgaagtctcttttatatagaccttagtggtcccctaatactgtatctgcagtctcttttatatagaccttagtggtcccctaatactgtatctgaagtctcttttatatagacctcagtggtcccctaatactgtatctgcagtctcttttatatagaccttagtggtcccctaatactgtatctgaagtctcttttatataggccttagtggtcccctaatactgtatctgaagtctctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17008 True 425 lncRNA 0.38 1 47943938 47944362

Neighbor

gene id symbol gene type direction distance location
si:ch73-6k14.2 NA coding upstream 1542573 46392846 ~ 46401365 (+)
LOC120562127 NA coding upstream 1570098 46346970 ~ 46373840 (+)
LOC120557716 LOC104930044,LOC103368287,LOC102204811,LOC102301891 coding upstream 1606605 46318376 ~ 46337333 (+)
gstt1b NA coding upstream 1842611 46080099 ~ 46101327 (+)
ddt ddt,LOC103368817,LOC104931754,LOC108247357 coding upstream 1864919 46068792 ~ 46079019 (+)
LOC120543662 NA coding downstream 256508 48200870 ~ 48202754 (+)
neurl1aa LOC108246381,LOC103355274,LOC104926624,LOC102796982,LOC101477033,LOC102303708,LOC100693641 coding downstream 269942 48214304 ~ 48320857 (+)
LOC120564817 slc24a3,LOC100695245 coding downstream 553103 48497465 ~ 48609279 (+)
LOC120556912 rin2 coding downstream 666917 48611279 ~ 48704119 (+)
LOC120556923 NA coding downstream 770115 48714477 ~ 48721252 (+)
G12777 NA non-coding upstream 21519 47922167 ~ 47922419 (+)
G12767 NA non-coding upstream 83911 47859361 ~ 47860027 (+)
G12757 NA non-coding upstream 165287 47778296 ~ 47778651 (+)
G12756 NA non-coding upstream 190624 47752785 ~ 47753314 (+)
LOC120544411 NA non-coding upstream 215888 47726660 ~ 47728050 (+)
G12781 NA non-coding downstream 32211 47976573 ~ 47977066 (+)
G12784 NA non-coding downstream 39189 47983551 ~ 47983884 (+)
G12791 NA non-coding downstream 92859 48037221 ~ 48037484 (+)
G12801 NA non-coding downstream 121760 48066122 ~ 48066354 (+)
G12802 NA non-coding downstream 128913 48073275 ~ 48074049 (+)
LOC120564084 LOC100694180 other upstream 818451 46846017 ~ 47125487 (+)
G12553 NA other upstream 1526165 46416428 ~ 46417773 (+)
trnak-uuu_1 NA other upstream 1736213 46207653 ~ 46207725 (+)
trnat-ugu NA other upstream 1736934 46206932 ~ 46207004 (+)
G12491 NA other upstream 1774249 46166405 ~ 46169689 (+)
G12872 NA other downstream 484438 48428800 ~ 48488219 (+)
G12873 NA other downstream 540886 48485248 ~ 48486493 (+)

Expression


Co-expression Network