G12784


Basic Information

Item Value
gene id G12784
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 47983551 ~ 47983884 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU17014
aatccctcagcatcaataatgcacattagattagattagattatactttattgtcattgtgcagagtacaagtacaaagacaacaaaatgcagtttgcgtccaaccagaagtgaaaaaaaatcaaatatgtataactaagtgtaagtaatgaacaacatgtgcagatatgtgcaatgtagtaggagtaacatagtaagaatatagatatatgcagggtattaacagaatatattataagaaaaacggaataaatatggatattcagtatgaatcacatagacagatatgtgcagtgtggtaacagtaccattgtagtgcagaaacggtaacgta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17014 True 334 lncRNA 0.53 1 47983551 47983884

Neighbor

gene id symbol gene type direction distance location
si:ch73-6k14.2 NA coding upstream 1582186 46392846 ~ 46401365 (+)
LOC120562127 NA coding upstream 1609711 46346970 ~ 46373840 (+)
LOC120557716 LOC104930044,LOC103368287,LOC102204811,LOC102301891 coding upstream 1646218 46318376 ~ 46337333 (+)
gstt1b NA coding upstream 1882224 46080099 ~ 46101327 (+)
ddt ddt,LOC103368817,LOC104931754,LOC108247357 coding upstream 1904532 46068792 ~ 46079019 (+)
LOC120543662 NA coding downstream 216986 48200870 ~ 48202754 (+)
neurl1aa LOC108246381,LOC103355274,LOC104926624,LOC102796982,LOC101477033,LOC102303708,LOC100693641 coding downstream 230420 48214304 ~ 48320857 (+)
LOC120564817 slc24a3,LOC100695245 coding downstream 513581 48497465 ~ 48609279 (+)
LOC120556912 rin2 coding downstream 627395 48611279 ~ 48704119 (+)
LOC120556923 NA coding downstream 730593 48714477 ~ 48721252 (+)
G12781 NA non-coding upstream 6485 47976573 ~ 47977066 (+)
G12778 NA non-coding upstream 39189 47943938 ~ 47944362 (+)
G12777 NA non-coding upstream 61132 47922167 ~ 47922419 (+)
G12767 NA non-coding upstream 123524 47859361 ~ 47860027 (+)
G12757 NA non-coding upstream 204900 47778296 ~ 47778651 (+)
G12791 NA non-coding downstream 53337 48037221 ~ 48037484 (+)
G12801 NA non-coding downstream 82238 48066122 ~ 48066354 (+)
G12802 NA non-coding downstream 89391 48073275 ~ 48074049 (+)
G12804 NA non-coding downstream 95942 48079826 ~ 48080062 (+)
G12805 NA non-coding downstream 108887 48092771 ~ 48093031 (+)
LOC120564084 LOC100694180 other upstream 858064 46846017 ~ 47125487 (+)
G12553 NA other upstream 1565778 46416428 ~ 46417773 (+)
trnak-uuu_1 NA other upstream 1775826 46207653 ~ 46207725 (+)
trnat-ugu NA other upstream 1776547 46206932 ~ 46207004 (+)
G12491 NA other upstream 1813862 46166405 ~ 46169689 (+)
G12872 NA other downstream 444916 48428800 ~ 48488219 (+)
G12873 NA other downstream 501364 48485248 ~ 48486493 (+)

Expression


Co-expression Network