G12844


Basic Information

Item Value
gene id G12844
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 48328015 ~ 48329753 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU17078
ctgaatacttcttccaccagtgCTCTTGCAGTACAGAGTGAAGGGGTTTCTATTCGTCTGTTAACTTTACAGTAGCATGCTTGCTTCAAACAGGTGCAACATTTCTTCCGCTTCACAACATGTTCCATGGTCTTTCTTCTTTGTTGGTATACTATTGGACATCCTAAATGGAGTGTCTATAGTGTTTGTATGCATTTGACCTTTGACACTAAGACCTGAAGAAATTGAAATGTGAGTTGGCCTGTAACAGATGTAGCCAGCCATGCCCTTTGAGCTCCGGGTGAAACACAATGCTCAGTCATCTGGGCCACCCCCCCTCCCCGGCTCGCTGTTACATAATGTCCCAGCCCCAGCTGCTTGGGGGGCTTGGCGGGACCAGGTAGGGGATTAGGTGATCAGTAGAAATACCTGCACCCTACTTTGAAACAGAAGTTGTAGATGTGCCTCTAAATGATTGCACTATAAATTCATGAAGCACCTCTCCCAGATGTCCCTTCCCAGCTCCCCGATAACCGTCTGTCTGCAGCAGACCGACTCATGACATCTCCATATAAAAGAACTGACTGAATATGAATAAAATGAGTAATAATCTCATGAAAAGAATAATCCAGACGAGTGTATCGGAAACTTGTCATTCTTCAACTGAGCCTTCATAACCCTGCCACAGATCACCATCCTTCAATGTTCACAACCAATGTTATTAGTTATGCTGTATAGAAAAAATACCGATCATGATGAAGTTAAATTTCAAGACTCAAATTCAATGGACGTATTGAGTTGGTAATGTGCAGGTCTATTCATATGAAAATCTCTCTGTGCtcgctgtctgtgtgtctgtctgtctccctccctaacctgtctgtctggctgtgtctgtctgtctgtcttatcAACGCTGATGCTGTCTGGAGGAGGCTTCCAAGCAAGAATGGTTCAAGAGCCCCATCTAGTGGAGAAACACTGGTATGGTCACCTGTGTGTTTGTCCACACATGAAGGCTTTAGttacaaacaaaaatactttgGATTTGTAATTACCTGTTAAAATAGATATTATATGTAGATATAGATATTTCAGTTCATGTGACCAAAGTCCATACTGTGGTCACATGAACTGAAATATCTATCTCTCTGAAAAAAAATAGCTCTGGAAAAAGATAAGTAATGGGCCTTTTGGcaagtttttctttgtttgtggaCCTTAAAACTTTTATATTACCAAGGCGTAAAAGTACTCTGTCGTGTGACAGGTAAGGCTTTTAGTCACATTAGAAGCATTATAGCCTTTTTTGATTCACTCTAACAGGTCTCATCATTGTTGTTTCCAGCTGCAACAGCTGTTTCCATCTGAAAAGCTCAGATATAACTCCTGTAGGCTACATACTGTACCTGCTCATTATATCTCAGTCTAAGTCAGAAAAGAATAAATGAACCTCCCGAAAACCTGCAGGCCTATTTTGCCTTAAAATGTAATttcggtatttttcaacctggacctcATATTGAGCTACCCTACttttaaccacatttatagAGGATGAACGtccattctgatagatatttccCACCTGACAGAATGTGCTACGttacttttaaaggtcccatgacatggatgcttttatatagaccttagtggtcccctaatactgtatttgaagtctcttttatatagaccttagtggtcccctaatactgtatttgaagtctcttttatatagaccttagtggtcccctaatact

Function

NR:

description
PREDICTED: interferon-induced protein 44-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17078 True 1739 lncRNA 0.41 1 48328015 48329753

Neighbor

gene id symbol gene type direction distance location
neurl1aa LOC108246381,LOC103355274,LOC104926624,LOC102796982,LOC101477033,LOC102303708,LOC100693641 coding upstream 7158 48214304 ~ 48320857 (+)
LOC120543662 NA coding upstream 125261 48200870 ~ 48202754 (+)
si:ch73-6k14.2 NA coding upstream 1926650 46392846 ~ 46401365 (+)
LOC120562127 NA coding upstream 1954175 46346970 ~ 46373840 (+)
LOC120557716 LOC104930044,LOC103368287,LOC102204811,LOC102301891 coding upstream 1990682 46318376 ~ 46337333 (+)
LOC120564817 slc24a3,LOC100695245 coding downstream 167712 48497465 ~ 48609279 (+)
LOC120556912 rin2 coding downstream 281526 48611279 ~ 48704119 (+)
LOC120556923 NA coding downstream 384724 48714477 ~ 48721252 (+)
G12827 NA non-coding upstream 127919 48199866 ~ 48200096 (+)
G12826 NA non-coding upstream 132283 48195518 ~ 48195732 (+)
G12825 NA non-coding upstream 137379 48190349 ~ 48190636 (+)
G12823 NA non-coding upstream 138217 48189253 ~ 48189798 (+)
LOC120544319 NA non-coding upstream 226051 48101483 ~ 48101964 (+)
G12845 NA non-coding downstream 701 48330454 ~ 48331505 (+)
G12846 NA non-coding downstream 4472 48334225 ~ 48334737 (+)
G12849 NA non-coding downstream 9112 48338865 ~ 48339107 (+)
G12850 NA non-coding downstream 9439 48339192 ~ 48339516 (+)
LOC120544367 NA non-coding downstream 43738 48373491 ~ 48377153 (+)
LOC120564084 LOC100694180 other upstream 1202528 46846017 ~ 47125487 (+)
G12553 NA other upstream 1910242 46416428 ~ 46417773 (+)
trnak-uuu_1 NA other upstream 2120290 46207653 ~ 46207725 (+)
trnat-ugu NA other upstream 2121011 46206932 ~ 46207004 (+)
G12491 NA other upstream 2158326 46166405 ~ 46169689 (+)
G12872 NA other downstream 99047 48428800 ~ 48488219 (+)
G12873 NA other downstream 155495 48485248 ~ 48486493 (+)

Expression


Co-expression Network