G1250


Basic Information

Item Value
gene id G1250
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 3558650 ~ 3561559 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU1737
cagacacacacatacagacacacacacacacacacacacacacatacagacacacacacacacacagacacacacacacatacagacatacacacacatacacacatacagacacacgcacatacagacacagacacacacagacacacacacacatacacacacacacacacacacacatacacacacacatacagacatacacacacacacacacacacacacacacacacacacacacacacatacagacagacacacacacacacatacagacagacacacacacacacatacagacagacacacacacacacacacacatacagacacacacacacacacacacacaccaccttcTCCACACGTCAGTTTAAATGTCCCACTGTTGGTATTTGTGGTCGAAGCTCTAAAATCCAACACTTGAGAACAGACTCTGAAGCAGCGCTGCCTTCACTGACCTGGGGAAGttgttttccagtttttttgaaaacaatttccccagaaaaaaaaataacccagccaacctttcttttttttatttatttaaatcatttgtTCAGTTTTTATGATGTCACTTAAAGGGTAGTTAGTTTATTCCAACCTGGGGTCTATGTTCTCATGTTTATGTGTCCCTGATGGCAACCACACTGACATTAGTCCagtactaaactctgaaatcaccaaactccaccagactccatgtaaataatcaggacttttagcgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagcgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagtgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagtgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagcgtgtatagagccagcatatctccacatgtaaatgggtgaattaaacagttttatttagtttctgtccgccttaaatgaagtgtgttttatgatgataaaagtcctgattatttacatggagtctggtggagtttggtgatggtgatttcggggctgtttcatgttaaactaaaaggatcttactctttaactaaaaggtctatctctgtagggatccatcccataatgttgtcagacacttagaataataatctgagtctgtcagcagcaacaacagaacttttagtggactctacctgctgctgaacattagtcctgtagggttacattacagctcggttctggtttaatactggaccaggttcagacactcagacacacaaacatgaggCCATAGAGTTCAGTTTAAAGCCCCCAAAAGTTCCCCTTTTTAAAGTGAGTAGTGGGTGACAGAGTTCAGAGTGACGGACGGCTGCGGCTGACTGATAAGACCTTGAGTCACATGACGGGTCCACGCTGCAGGCCTTGGTCTTCACAGGAAACCACAATCAGACATGGGCCCTCAATCTGTCAGCAGCTTTCTCTCAACTCTTCCTGTATGGACCTttatcacagcagacatgttgacttgtcatagtaggaaaagcacagctgacactgataaccttaacaatggctcagttccatcaagtgtcctagtaagatatttcagtgagtcagcatgac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1737 True 1680 lncRNA 0.40 2 3558650 3561559

Neighbor

gene id symbol gene type direction distance location
trnak-uuu NA coding downstream 131628 3426950 ~ 3427022 (-)
kat14 NA coding downstream 158671 3383531 ~ 3399979 (-)
LOC120550893 NA coding downstream 176359 3351346 ~ 3382291 (-)
LOC120550828 NA coding downstream 272393 3279426 ~ 3286257 (-)
gemin6 NA coding downstream 451372 3099669 ~ 3107278 (-)
srd5a2a NA coding upstream 105354 3666913 ~ 3682870 (-)
slc8a1a LOC100709284,LOC101487495,LOC102200447 coding upstream 260421 3821980 ~ 3853797 (-)
LOC120568258 NA coding upstream 318328 3879887 ~ 3901747 (-)
LOC120568380 NA coding upstream 352239 3913798 ~ 3945416 (-)
LOC120568386 NA coding upstream 415732 3977291 ~ 4228514 (-)
G1243 NA non-coding downstream 21943 3535855 ~ 3536707 (-)
G1245 NA non-coding downstream 29983 3527637 ~ 3528667 (-)
G1236 NA non-coding downstream 63892 3491994 ~ 3494758 (-)
G1187 LOC104946033 non-coding downstream 69345 3489039 ~ 3489305 (-)
G1183 NA non-coding downstream 78462 3470981 ~ 3480188 (-)
G1252 NA non-coding upstream 27997 3589556 ~ 3656865 (-)
LOC120564109 NA non-coding upstream 37373 3598932 ~ 3602164 (-)
LOC120564113 NA non-coding upstream 48066 3609625 ~ 3610016 (-)
LOC120564118 NA non-coding upstream 49985 3611544 ~ 3611947 (-)
G1251 NA non-coding upstream 93057 3654616 ~ 3656320 (-)
LOC120551303 NA other downstream 148355 3408821 ~ 3410295 (-)
LOC120551010 NA other downstream 245601 3305469 ~ 3313049 (-)
LOC120550734 LOC106675350 other downstream 284207 3269522 ~ 3274443 (-)
LOC120550954 NA other downstream 317153 3232624 ~ 3241497 (-)
G1008 tmem178a,LOC102307988 other downstream 580535 2975238 ~ 2978115 (-)
G1240 NA other upstream 19659 3581218 ~ 3648230 (-)
G1242 NA other upstream 87129 3648688 ~ 3672538 (-)
dpy30 NA other upstream 98281 3659840 ~ 3664389 (-)
G1464 NA other upstream 783988 4345547 ~ 4346086 (-)
G1623 NA other upstream 1080027 4641586 ~ 4788577 (-)

Expression


Co-expression Network