G1440


Basic Information

Item Value
gene id G1440
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 4247662 ~ 4251483 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU1997
aaaaagtgAGTCTCAGTGTTCACACAATCACGTGCCAAGATtgaaattcaattcaaaatcaaaatgtgATCCTGGAAGAGGGagtaaaaacatttcatttgcaTTTTCAAATCTTATTATTATACAGcttgtattttgaaaatgccAGATTTAAACAATATAGTCGAAATCAATCTTAAATGCTATTAacgtgcaaacaaaacattcaaaCCTTTGTGTTGCAGTGaatcaaagacaaaaaacatttcatgatACAATAACAAAATTTCTAAGGCAGAAATAAAACCCAAAATCACGCTGGGTTTCCACCAGCACATCTCCGCTGTATCTGTGACGTGAAACGGAGGTGTGTCACCACAACATGACGACGACAAGGAGTTCACATTTTGCAGACAAGGAGTTGTTTGTGTTGATGTTTTCTATCAGTTTCTATCTGGCCTAACAACTGTTGGCACACACTTTGCCATTTAGTTGGTAATAACGTTATATTACTAGCAACAAGCTAGTTGTcgtggggtcagccctatgttcccacagccctatgatcccacatccctatgttcccacagccctatgttccctcagccctatgttcccacagccctatggtcccacagccctatggtcccacagccctatggtcccacagctctatgttcccacagccctatgttcccacagccctatgatcccacatccctatgttcccacagccctatgttcccacagccctatgttcccacagccctatgttccctcagccctatgttcccacagccctatgttcccGTTGTCGTTGCTGCAATGTTAACGttaccacaatgtaaaaattcACCAGGAGTACCAACCTTTTgccaagctagctgttagcaTCCCTGTAGTCATATAGAGACGTATCATAAGCTAGAGGAAAAATCACAATCTTTTGATTTGCACGTATAGCATGTGTGTATACACGGCAGAATATATTGGAGGCACGTTGGCGAGTCTGCTCTCTCATTGGCTACCGCTCTGCGAAAGTTGACTCTGAGTCGACTTTGGGAGAGCGGTGAACATCCGGTCATACCGCCGTCCTCAGAGGGAACCAATTGAAACGCTCCGCTCTGCCGTTATTTCAGCTGCCTGTGGAAACCCAGCGTGAAGAGATTTAAGGTCACTCCATTTTACTGGACGATTGTCTGTGACAAATAAAGTTTCTTCTTCTGAAATCAGACCTTAAAGTAAAATGTCTTTCTCAGTTTAAACACGCAGTCAAACTGAGAAAATGTAACTTCAGAAAGCTTGAAATGTGTAAATTGTAGCTGTTTATATTCTTCAGCTACTCGATAGTTTATCTGATATTTTCATCAAAATATAAAACTGCAATTCACTGATTGTTTTGATATTTAAACCTCGATATGTTTGTCTTTTATTAAATAGTATAACTATTTGTCATGattttactgtatatttttaataataaagtgCAGTTTGAAAGTTAGTGCTGAAGTCAGAAATCAGATCCTTTGAGCTGCCAAACTTAAATCTGAATCATAGTTCACAGGATCTGTTTCATCAACAATAATCAGTCTGCTTCATGTCTTCATATATTTTAGTAAAGCTGTTCTTGTGATGCATTCGTACATGTAGCTACGAAAGTAAAGGTTTGTTCTTTAAACTCGTCATGTTCAGACTTTGACATCTTCGGATCAACTGAAGAGGTCACATTTTATGCTGCAGACGATGTTTTAAACAATATATCATATTTATAATAATGCTGCCATTTGTTTTTTAGAATCAAACTCTTAATTTGGCGGGTCAGAGCTGAAGACAGGAACCGGTTCATGCTCCTGACTTTGAACTCTCATAGGCGTATTGGTTTTACTTTGGCAGCCACTTCCTGTGGTTCTCGCGGATTTTTAATTCATTATATGAATACGTACAAATATAACGCACTCAAACATTACAACTGATCCACTTTAGAGTGAGTTCCTCCAGAGCTGAATCATGGGTAATATTCTGTCACGGAGTAAAACTTAAATAACGTTTAACGTCAAAAAGATTAAAAGGCACATTCAGTGATGCAGAGCGGTCAGTGAGATGCTACTTTAGTGTTAGATCACCGTCTGACATTTTAGTAAGTCATGTTTTCAGTCTTCTTCAGATTCTGCTAACGTCAGGCTAACGTCAGGCTAACATCCAGCTAACGTTTTAACGTTAGATTTTTCTAGATTTTGGGGAACTTTACAGCAACCTTTTCTCTTAACATTTtaagtaaaaacacaaacaataatgCATGAACGACTGTTcatcctgtgggtcgtattataAATGACTCCTAACGTCGTACTCTTTTATACTACTTGAAAAGATTTCTTATTTATAGCCAGTAGCGACGTTTTTACAGAGAAAACTGACAACTGGTGGCAGATTTGATCAGCTGTAGCTAATACACTTTGTGCAAAAGCTGACATGAACCTTTCGGCTGTAGTTCTCTGAAAGCTGTTTGATCTTACGTTGAGATCATTTGGGAGAGGAAGATTTCGATGAAATGTACCCCCCAACCCTAGTGTTTAGAAGGTCGGGGTACACTAACAGTGAACACATCCTTTAATTATCTCCCCATTTTCAGCCGATTCTTGGAGCAAAAATCATGGGTGTGTTCTGAAAGGCTTTGGGAGGAAGAGGATGTGAGAAACATCTGATATACTTTGTTGAAGATTGGTGACCCCAGGCAGTGGAGAAGTATGTAAACCTTCGGCTGAACAGCAAACCTGAAAGTCAGCCAAACTGATTGAAGTGGTTTTCCAGCATTGATGATATGATGACGTCTGATCAGACTGAAAACACAGAGAGGGCTTTATGGGATTTGCTGATGAGAAGATTGGTCGAACGTTCCGTCCCAACACCACGCAAGGATTGGCCGAAAAGTGAGACTTTTTGGCATCTCGAGGTGACTTAAAAGGTTCAATCAGGTCCGTTAGTGAACCTGCGTCATAGTGAGTACGTCCACATGCACACTCATTTGATACGATCATGTAAACAGTACATCCTTTTCGATATTCTGTATAAGGCCTTTTTCTAAATTTAGCATTTTATAtcaaccctcctgttgtcctcgggtcaaatttgacccattttcaaaaagttttttttattgtaaaagaacgttgaaaaaagtgacagaaatgtcaggaaaagcttcaaaaacgcgggggtggggggggggggagacacaaaaacgtcaaaaggtgCAGAAAAGAACGTTgggaataagtgacaaaaacgtcagtggaaaagcaacaaaatagTCAAATAAGACgtccaaaacgttgaaaaaaagtttacattttgacccagaaaaactaaaagttgcccggccgacaggaagacaacaggagggttaagatgATATGTCGGAAGTTTTCAGGTTTATGAGGCATTCTGTGGACGTGTTTACAGCACATTCAGAATCTGCGTCtcaatcgtttttttttttactgcagcttgtgacagtttacggcctctcgCCTGTCTCCGGCTTACGGTccgctctgtgcgttgctatggttac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1997 True 3553 lncRNA 0.54 2 4247662 4251483

Neighbor

gene id symbol gene type direction distance location
LOC120568355 LOC103356192,LOC104948400,LOC105918398 coding downstream 7008 4233883 ~ 4240654 (-)
LOC120568386 NA coding downstream 19148 3977291 ~ 4228514 (-)
LOC120562966 NA coding downstream 169675 4039169 ~ 4077987 (-)
LOC120568346 NA coding downstream 233839 4006070 ~ 4013823 (-)
LOC120568358 LOC103148993,LOC108243373 coding downstream 242870 4002437 ~ 4004792 (-)
LOC120568341 LOC108251661,LOC106676713 coding upstream 88718 4340201 ~ 4344817 (-)
ttbk1a ttbk1 coding upstream 98711 4350194 ~ 4408366 (-)
LOC120568276 LOC103369331,LOC103383363,LOC101482017,LOC102297858 coding upstream 204799 4456282 ~ 4495278 (-)
LOC120568286 NA coding upstream 292413 4543896 ~ 4617183 (-)
LOC120563501 NA coding upstream 378570 4630053 ~ 4659684 (-)
LOC120568400 NA non-coding downstream 273192 3972021 ~ 3974470 (-)
LOC120568412 NA non-coding downstream 283783 3954828 ~ 3963879 (-)
LOC120568407 NA non-coding downstream 371084 3873544 ~ 3876578 (-)
G1318 NA non-coding downstream 377884 3869463 ~ 3869778 (-)
G1312 NA non-coding downstream 430808 3816015 ~ 3816854 (-)
G1459 NA non-coding upstream 81606 4333089 ~ 4333324 (-)
G1477 NA non-coding upstream 168685 4420168 ~ 4450896 (-)
G1478 NA non-coding upstream 168986 4420469 ~ 4424244 (-)
G1505 NA non-coding upstream 213928 4465411 ~ 4465616 (-)
G1507 NA non-coding upstream 241364 4492847 ~ 4493168 (-)
G1242 NA other downstream 575124 3648688 ~ 3672538 (-)
dpy30 NA other downstream 583273 3659840 ~ 3664389 (-)
LOC120555401 tmem63a,LOC106529083,LOC106934241,LOC103130112,LOC106936753,LOC102796925 other downstream 599189 3494887 ~ 3648473 (-)
G1240 NA other downstream 599432 3581218 ~ 3648230 (-)
LOC120551303 NA other downstream 837367 3408821 ~ 3410295 (-)
G1464 NA other upstream 94064 4345547 ~ 4346086 (-)
G1623 NA other upstream 390103 4641586 ~ 4788577 (-)
LOC120563598 NA other upstream 523334 4774817 ~ 4783916 (-)
G1722 hnrnpll,LOC108249392,LOC104956991,LOC106530872,LOC103368822 other upstream 825123 5076606 ~ 5085518 (-)
G1726 NA other upstream 845886 5097369 ~ 5097634 (-)

Expression


Co-expression Network