G1459


Basic Information

Item Value
gene id G1459
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 4333089 ~ 4333324 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU2019
cagggaatgattgtaaagatttacaaagaatatgtttaggtcatttcctctctaactgggagttTTTGGGattgattggtgggattgctgtggacgaagtacacacagagatacactggtaagagccaatgaggtttaaccatgaaTCAGCTAATTAGTAaataaatagctcacattattgtattgtgtcaacagttaacttcatttaatattggatgtggcgttttcttcTGCGG

Function

GO:

id name namespace
GO:0043292 contractile fiber cellular_component
GO:0044449 obsolete contractile fiber part cellular_component
GO:0036379 myofilament cellular_component
GO:0005861 troponin complex cellular_component
GO:0005865 striated muscle thin filament cellular_component
GO:0030016 myofibril cellular_component
GO:0030017 sarcomere cellular_component

KEGG:

id description
ko04260 Cardiac muscle contraction

RNA

RNA id representative length rna type GC content exon number start site end site
TU2019 True 236 lncRNA 0.41 1 4333089 4333324

Neighbor

gene id symbol gene type direction distance location
LOC120568355 LOC103356192,LOC104948400,LOC105918398 coding downstream 92435 4233883 ~ 4240654 (-)
LOC120568386 NA coding downstream 104575 3977291 ~ 4228514 (-)
LOC120568341 LOC108251661,LOC106676713 coding upstream 6877 4340201 ~ 4344817 (-)
ttbk1a ttbk1 coding upstream 16870 4350194 ~ 4408366 (-)
LOC120568276 LOC103369331,LOC103383363,LOC101482017,LOC102297858 coding upstream 122958 4456282 ~ 4495278 (-)
LOC120568286 NA coding upstream 210572 4543896 ~ 4617183 (-)
LOC120563501 NA coding upstream 296729 4630053 ~ 4659684 (-)
G1436 NA non-coding downstream 11864 4239243 ~ 4321225 (-)
G1440 NA non-coding downstream 81606 4247662 ~ 4251483 (-)
LOC120568400 NA non-coding downstream 358619 3972021 ~ 3974470 (-)
LOC120568412 NA non-coding downstream 369210 3954828 ~ 3963879 (-)
LOC120568407 NA non-coding downstream 456511 3873544 ~ 3876578 (-)
G1477 NA non-coding upstream 86844 4420168 ~ 4450896 (-)
G1478 NA non-coding upstream 87145 4420469 ~ 4424244 (-)
G1505 NA non-coding upstream 132087 4465411 ~ 4465616 (-)
G1507 NA non-coding upstream 159523 4492847 ~ 4493168 (-)
G1514 NA non-coding upstream 182060 4515384 ~ 4520078 (-)
G1242 NA other downstream 660551 3648688 ~ 3672538 (-)
dpy30 NA other downstream 668700 3659840 ~ 3664389 (-)
LOC120555401 tmem63a,LOC106529083,LOC106934241,LOC103130112,LOC106936753,LOC102796925 other downstream 684616 3494887 ~ 3648473 (-)
G1240 NA other downstream 684859 3581218 ~ 3648230 (-)
LOC120551303 NA other downstream 922794 3408821 ~ 3410295 (-)
G1464 NA other upstream 12223 4345547 ~ 4346086 (-)
G1623 NA other upstream 308262 4641586 ~ 4788577 (-)
LOC120563598 NA other upstream 441493 4774817 ~ 4783916 (-)
G1722 hnrnpll,LOC108249392,LOC104956991,LOC106530872,LOC103368822 other upstream 743282 5076606 ~ 5085518 (-)
G1726 NA other upstream 764045 5097369 ~ 5097634 (-)

Expression


Co-expression Network