G1784


Basic Information

Item Value
gene id G1784
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 5349112 ~ 5414538 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU2471
aaagtgcttgttttgccgctgacagactcagattattattctaagtgtctgacaacattatggaaaggatttctaaggaggtcgacctttctgttaaagagtaagattctttttttaaatataaaaacatccacgAAATTCCGTTTtttaaacccaccagactccatgtaaataaacagtgattttagcatcgtaaaacacacttcattcaaagtccacagaaacaaaataaaactatgagaagccgttttgggtcgtctttccacttttccaaccatcacaactctagttttggttgaaataaacacacagtttactgatttacatgtgaaaatatgttggctctatacatgctaaaagtcctgattatttacatggagtctggtggagatatgccggctctatacacgctaaaagtcctgattatttacatggagtctggtggagatatgccggctctatacacactaaaagtcctgattatttacatggagtctggtggagatatgccggctctatacacgctaaaagtcctgattatttacatggagtctggtggagatatgctggctctatacacgctaaaagtcctgattatttacatggagtctggtggagatatgccggctctatacacgctaaaagtagtgtttttttaaatggagtctggtgggttatggttatggtttctggttaaacagaaaggtctcaaagaggtttttaaaggtccatctctgtagggatcctttctataatgttgtcagacacttagaataataatctgagtctgtcagcggcaaaacctgcactttagtgaaggtaaatacaagatGGACAATTACTATTAACTCACAtcgtagcttgtttctctgctgccgactgcagagatctctcttaacactggaccaatgtcaaagattattgttcccatcagtcacttagacacaaaaaggtagttaccctttaaccctctgaggtctacgGGCATTTTTAGATATCTTCttgaatttacattttttagGGTGTTTTCATATAAGTGATCCccgtgtgtttcatatcaaaatgttcagaacaaccTCAGCTTTCCGTGTAGTGATGCCCACAGTTTTTCTAGACTtgtgtgtaaagagataatttggccctaaagtGGAAATATTTCTCcaatctcttgtgaaaacatacCTACACTCAATAGTTTTTGGGATGAttttgaatggagtctggttCCCAGTGTTGCAGAAACATGACATGGCAGTTTATGGCACGCTGAATGAAAATCAGGTGGtttttggtgcatatttttggtttattttcCAACGCGTTCCCGTGAACGGATTCTTAACTCATGCACAACAATCGGAAGACATTAACGCCGGGCGCCAGCTGTTCACATGACggttaaaggagaattctggccaattttttacgttaatcttgatcgctataaatatgcgtGTACTGTAGTTTGAAAAAATCACGTCCCGAATCGGTGCAGGCAACACGgagtagctgcagctacgtgtACGAGCTTCCActtagctaaaacggcagttgttggggcaagttttagagtgcctttgtgcctcttaacagacacaacatgcaattaaaatgcctgtgcaacatgaacagggcccttacgtgacaacaagatgcgttttccactcagacattgtttaaattcacctaccctgtctcgatcctgctgGTAGGTAGCTcgccctgttagctgctagttGCTAGCTGCTAGTTGCTAGCTGCTAGTTGCTAGCTGCTAgttgctagctgctagctgctagctgctagctgccgtccatgataagtgtgttcagccaggcgtCTGTAGCGTCACTGTGTCCACGTTCGGACACTTATTGGCCAACGTTCTATCAAAATATctgttcaaatataaatgatctattaatgttttcagttaatttaaCGGTGTAAAACTAAAGTGTAGCTTCTTACCTTTCTAACGGTATATAGCTTTAACTGTTTACTTTAATTTCTTACTTTACAAGAGCCGGCTAAAGTACGCTATCTCCGGTGAGTTAGCCGTTAGCCTTAATTTCCAGTACAGTAAAAATAGAAACGTTTTAGTGGAAAAGATCGTGGCCCGAGCGCTATTACTTCCTCATCAAAGTAACTTTCATACACTAATTAGACATCTAAATGTCCACGTACATATAGGAACATTCATACGTAGATTGTTAGATGGGTGTAGATCAAGTCTGCTAACATTTTTGGTAAAGATTGGAAACGCAAGTACCGCGAAAAGACCGTAAGCTGCGTCAAGTCGGAAGTGTGTTATGTCAAGATTAACgttaaaaattggccggaattctccttttaaaTTCAGCGGTatttacagttaagtttagccgacaaaaaggCGAGCGACAAAAAGGCGAGCGACATGCGGCGACGACCGTTAAGTTTAGACAACAAACCGACTGGTTAAGATTCGAAAAAAGATggcgggaaagtcgccggacgacacaatcttctgaacatagtcaacggcttgaatgtaacggacgttcattaatgtgaaaaagttacgcactgaaGCTctaacttcttccgggacatgAACTCCAAGCTCcccggcttgaaagcgctgtgttttattacatattttttacgTACGAATGGTTCACAAGAACCGTCTATTTTCATACTCAAATAATCCAGAATCAATTAACCTAAATAGTTTAATTAATACCAGACTCCATTCACATCTGTGTACTTTATTAATTATAAAACCACTGGAGCTGATTATCAcactacatacatatatacatacatatatacatacgtacatatacccatacatacagtacatacacacacacatacgtacgtacgtacatatatacatacatatatatgtacgtacatacatacataacgtacatacacacatacgtacatatatacacatacatacacacacatacatacatacatacacacacatacatatatacacatacatacacacacatacatacatacatacacacacatacatacatactacatatatacatacatacgtacgtacatacatacacacacacatacatatatacacatacatacatacatacatac

Function

NR:

description
TC1-like transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2471 True 3120 lncRNA 0.47 3 5349112 5414538

Neighbor

gene id symbol gene type direction distance location
LOC120563443 NA coding upstream 151995 5180196 ~ 5197117 (+)
LOC120563472 NA coding upstream 169370 5158881 ~ 5179742 (+)
LOC120563603 stxbp6 coding upstream 400000 4947658 ~ 4949112 (+)
LOC120563657 NA coding upstream 409642 4856686 ~ 4939470 (+)
zgc:172076 NA coding upstream 542405 4783353 ~ 4806707 (+)
ndufaf5 ndufaf5 coding downstream 86494 5501032 ~ 5518108 (+)
LOC120564466 NA coding downstream 175131 5589669 ~ 5591008 (+)
LOC120564476 NA coding downstream 191916 5606454 ~ 5607801 (+)
LOC120563910 NA coding downstream 375759 5790297 ~ 5803234 (+)
prokr1a LOC103383410,LOC101078632 coding downstream 624673 6039211 ~ 6058589 (+)
G1772 NA non-coding upstream 3213 5340592 ~ 5345899 (+)
G1773 LOC108251774,LOC106535048,LOC107394211 non-coding upstream 8641 5335347 ~ 5340471 (+)
G1782 NA non-coding upstream 24623 5324236 ~ 5324489 (+)
G1780 NA non-coding upstream 29808 5318782 ~ 5319304 (+)
G1759 NA non-coding upstream 52447 5284816 ~ 5296665 (+)
G1791 NA non-coding downstream 59895 5474433 ~ 5475665 (+)
G1792 NA non-coding downstream 69004 5483542 ~ 5487749 (+)
G1813 NA non-coding downstream 223162 5637700 ~ 5651160 (+)
G1817 NA non-coding downstream 275431 5689969 ~ 5692473 (+)
G1836 NA non-coding downstream 352605 5767143 ~ 5858270 (+)
LOC120563544 LOC100708833,LOC102313704,LOC101466655,LOC102192550 other upstream 21195 5235346 ~ 5327917 (+)
G1756 NA other upstream 126368 5218068 ~ 5222744 (+)
G1600 NA other upstream 310398 4977783 ~ 5038714 (+)
G1487 LOC103369331 other upstream 888708 4455207 ~ 4460404 (+)
pex6 pex6,LOC104944420,LOC104961583 other upstream 913026 4408438 ~ 4436086 (+)
snrpb2 snrpb2 other downstream 462009 5876547 ~ 5916374 (+)
LOC120573424 lgalsl,LOC104947409 other downstream 971063 6385601 ~ 6402640 (+)
aftpha LOC102296338,LOC102796226,LOC101483123,LOC102200161 other downstream 992862 6407400 ~ 6437217 (+)
G1973 NA other downstream 1117903 6532441 ~ 6534370 (+)
G2530 NA other downstream 2284727 7699265 ~ 7699540 (+)

Expression


Co-expression Network