G1825


Basic Information

Item Value
gene id G1825
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 5982165 ~ 6031193 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU2546
GTGATTCTTTGAAAGTGAGAAAATGTCTGTGGCTTTAAATAGAAATGCTACCAGGATGCAGAGTTGAAGAGATGAATGCATTAAATTATTTTGTTGCATATGTAATGGGAAGCATATAATaatcaatcaaaacaatgaAGTGTAAATCAATCACCACAGGAAATTGATTCTGTAAACAAATAATATGTGAATTATAACATGTACATTTGTTCCcttgaatataaatatatcaatACATGAAATAAGATGAGTGTTTAGTTTActctgacaggagagatgatcagagggGCAGAGGTTTTACCACCATCATATTTCCAGGGACTGAAGTATgggaagagtttctcagtgaaggagcagccagtaaaggagtagataagagctgcagcatctACATCATAAAAGGAGACAagaccctcctcataatccacaaacacccccaccttctgaggaggagacttcagagagagaaggactaAAGGGTCAGCAACAGCTTGGTACTCATTTCCATTTCTCAACAATATAGTCCAGTAACCTTTCTGAGGGTTCAGTGGGATGTTCTCTTTCCTGTTTACAGACTCTCTGGCCACTCCTAAAGCCCAGCCAGTCTTTCCTTTAACTTGAACCTCAAAGTAAAATCTACCTGAAGAGAAACTCTGCTTTCCTAAAACAAAGGGATTGAGAGAAAATCTCTCTGGATTGTTTGGGAGATTCTTCCTCACATTACCATGATTCACTTGTTTCCCatcatcagacaggatgagatAGGGATAtgctgtatcaggatcaagagtcacatccactgcatactgctggaccctcttcagctcagCTTTAATCAGCTTCTTCATTTCTTTACTGAGTGTCTCTTCCAGCTGAGCCACAGCTTTCATCACAGTCCCCTCATATGATGATGGATGGACGCTGACCTCTGTCCAGTCCTTGGTGGGTGGAGGGTGGTTGGTGTTTAGGGACTGGACactctggagaagatggaggtggtcttcagagcgtgagagctgctccacctcagtgcttctcttcatcagctcagagatttcctgttccagctctttgatgaaagcttcggcctgtttttctgttgttttctgcttctctttgatcgtgttgatgagctcattcaggcctctctcaacagactccttcagagaagtgaagacacgaacaccttctgctatctctctgcctgcatcttcctcactgaggtcgactgagtgtttgatctcctgaatcttcagtcgtttcttctggatcatctgctGAATTTCAGCCTCTGTCTTCCCCAGCTCTGCCTTCTTTTCTTCATAACCTTCTTTCAGAGGAACAACATCATGTGTCTTGTGATCTAAAACAGTgcagagcatgcagacacatgtctggtcggtcttacagaacagctccagaggTTTATCGTGCTTCGTACACATCCTGCCTTCCAGGTTCTCCACAGGGTcgatcagctgatgtcttttcagaCCTGCCGTTGTCAGATGAGACTCCAGGTGAGTCTCACAGTAGGAgaccagacacaccaggcaggacttcagggccttcagtttggttccagtgcagacgtcacagggaacttctcctggtttggacacttgttgctctgagctgctgctgctggctttctgtTGAGCTGACTGTCTGAACTGAGCAACCATCTCAGAAAGCAAAGTGTTGACGTGCAGCTCAGGTTTTGTGTTGAAAACCTTGTTACACATCGGACACAGGTACTGGTCATTAGTATTCCAGTGTTCATTGATGCAGTTCTTGCAGAAGTTGTGACCACATAGTATGGTGACAggatcagtgaacacatccagacagatggagcacagaaactTATCTTCAGATTGCAGATAGTTTGCAGCAGCCATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2546 True 1902 lncRNA 0.40 3 5982165 6031193

Neighbor

gene id symbol gene type direction distance location
LOC120563910 NA coding upstream 178931 5790297 ~ 5803234 (+)
LOC120564476 NA coding upstream 374364 5606454 ~ 5607801 (+)
LOC120564466 NA coding upstream 391157 5589669 ~ 5591008 (+)
ndufaf5 ndufaf5 coding upstream 464057 5501032 ~ 5518108 (+)
btbd3a LOC103354797,LOC102313104,LOC101466369,LOC100710091,LOC102793615,LOC104954790 coding upstream 610395 5361351 ~ 5371770 (+)
prokr1a LOC103383410,LOC101078632 coding downstream 8018 6039211 ~ 6058589 (+)
LOC120563871 NA coding downstream 57659 6088852 ~ 6093727 (+)
LOC120563868 NA coding downstream 73952 6105145 ~ 6109440 (+)
LOC120563973 NA coding downstream 89201 6120394 ~ 6127443 (+)
LOC120563935 NA coding downstream 101442 6132635 ~ 6146027 (+)
G1873 NA non-coding upstream 22064 5897705 ~ 5960101 (+)
G1871 NA non-coding upstream 23519 5880353 ~ 5958646 (+)
G1820 NA non-coding upstream 23899 5887302 ~ 5958266 (+)
G1886 LOC104947167 non-coding upstream 26902 5941449 ~ 5955263 (+)
LOC120564002 NA non-coding upstream 61140 5919555 ~ 5921025 (+)
G1897 NA non-coding downstream 8399 6039592 ~ 6130467 (+)
G1900 NA non-coding downstream 30935 6062128 ~ 6063637 (+)
G1898 NA non-coding downstream 80021 6111214 ~ 6111601 (+)
G1905 NA non-coding downstream 87854 6119047 ~ 6119529 (+)
G1906 NA non-coding downstream 94174 6125367 ~ 6126533 (+)
snrpb2 snrpb2 other upstream 65791 5876547 ~ 5916374 (+)
acaa1 acaa1,LOC102793903 other upstream 510756 5387393 ~ 5471409 (+)
G1775 NA other upstream 607258 5372617 ~ 5374907 (+)
LOC120563544 LOC100708833,LOC102313704,LOC101466655,LOC102192550 other upstream 654248 5235346 ~ 5327917 (+)
G1756 NA other upstream 759421 5218068 ~ 5222744 (+)
LOC120573424 lgalsl,LOC104947409 other downstream 354408 6385601 ~ 6402640 (+)
aftpha LOC102296338,LOC102796226,LOC101483123,LOC102200161 other downstream 376207 6407400 ~ 6437217 (+)
G1973 NA other downstream 501248 6532441 ~ 6534370 (+)
G2530 NA other downstream 1668072 7699265 ~ 7699540 (+)
G2557 NA other downstream 1910354 7941547 ~ 7948253 (+)

Expression


Co-expression Network