G1826


Basic Information

Item Value
gene id G1826
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 6208755 ~ 6217056 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU2547
AATCATACAACAAATGCAATGCGTATTCTCAGCAAGACCATCATTGTTTAttaaagtgattttatttttgcataAGATATTGATCGAGATAATAGTTTGCAGTGATGTCTGCACATTTAACCATTGAAACCAAATCTAAAAGGAAAGGATATTTGCCTTCGGTTTGATTCTTGAAATAAGAAAACTCATCCAGTTTTTCTTACAGATCGTTTGGACACGAGTGTGACAACCAAGAACTCTTTATTTAGACTGAAGATATGATCTCTGGAGTTCCTCACAGACACTCAGGATGTTTTACTCTGTCTGTAGTTCAGTATTAAAAGACTGCTATGTtgataataatacattattatacacataatcaacaaacaacataaatgagaccataaacaacatacaatatgtggctCCTATACAGTAAATAATTTAATGTGGAGGCTTCTATAACTATTTTCCATATTCACCTGCAGTGAATCCccttaaatgaaaataaatcaatacatgAAATAAGATGAGTGATTAGTTTACTCTGACAGGAGTGATGATCAGAGGTGCAGAGTTTTTACCACCATAACGCGGATTGAAGAATgggaagagtttctcagtgaaggagcagccagtaaaggagtagataagagCTGCAGTATCTACGTCATAAAAagagaccagaccctcctcataatccacaaacacccccaccttctgaggaggagacttcagagagagaCGGACAGCAGGGCCAGCAAGAGCTTCGTACTCATTTCTATTTCTCAACCATATAGTCCAGTTACCATACTGAGGGCCCGCTTTGATTTGCCCCTTCCTGTTGATGGACTCTCTGGCCACTCCTAAAGTCCATTCAGTCTTTCCTTTAACTTGAACCTCAAAGTAAAATCTGCCTGAAGAGAAACTCTGCTCTCCTAAAACACAATTACAATCAGAAAATCCCTCTGGGTTGTctgggagatttttttttaccttaccAGGATGTACTTGTTTCCCATCATGAGACAGGATGAGTTGAGGATGtgctgtatcaggatcaagagtcacatccactgcatactgctggaccctcttcagctcagaCTCAGCgagcagcttcttcatctcttTACTGAGCGTCTCCTCCAGCTGAACAACAGCTTTCACCACAGTCCCCTCATATGATGGACGGACGCTGACTTCTGTCCAGTCCTTGATGGGTGTAGGGTGATTGGTGTTTAGGGACTGGACactctggagaagatggaggtgaTCTTCAGAGCGTGAgagctgctccacctcagtgcttctcttcatcagctcagagatttcctgttccagctctttgatgAAGGCTTCggcctgtttttctgttgttttctgcttctctttgatcgtgttgatgagctcattcaggcctctctcaacggactccttcagagaagtgaagacctgaacaccttctgctatctctctgtctgcatcttcctcactgaggtcgactgagtgtttgatctcctgaatcttcagtcgtctcttctggatcatctgctgaatttcagcctccagctctgccttctTTTCTTCATGTCCTTCTTTCAGAGGAACAACATCATGCATCTTGTGATCTAAAACAGTgcagagcatgcagacacatgtctggtcggtcttacagaacagctccagaggTTTATCGTGCTTTGTACACATCCTGCCTTCCAGGTTCTCTACAGGGTcgatcagctgatgtcttttcagaCCTGACATGGtcagatgaggctccaggtgagtctcacagtaggagaccaaacacaccaggcaggacttcagggccttcagtttggttccagtgcagacgtcacagggaacttctcctggtttggacacttgttgctctgagctgctgctgctggctttctgtTGAGCTGACTGTCTGAACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2547 True 1925 lncRNA 0.61 2 6208755 6217056

Neighbor

gene id symbol gene type direction distance location
cnrip1a cnrip1,LOC102194292,LOC107094923,LOC101465016,LOC100711692,LOC106535151,LOC104918542 coding upstream 51364 6148380 ~ 6157391 (+)
LOC120563935 NA coding upstream 62728 6132635 ~ 6146027 (+)
LOC120563973 NA coding upstream 81312 6120394 ~ 6127443 (+)
LOC120563868 NA coding upstream 99315 6105145 ~ 6109440 (+)
LOC120563871 NA coding upstream 115028 6088852 ~ 6093727 (+)
LOC120569490 LOC105918390 coding downstream 121247 6338303 ~ 6377691 (+)
LOC120565047 actr2,actr2a,LOC107583198,LOC104930021,LOC108423375 coding downstream 293169 6510225 ~ 6528948 (+)
LOC120568096 LOC104918539,LOC100694188,LOC102198854,LOC101483894 coding downstream 374380 6591436 ~ 6659319 (+)
LOC120564833 mdha,mdh1,LOC107382285,LOC106536176 coding downstream 478528 6695584 ~ 6722958 (+)
LOC120564849 ugp2,LOC100710204,LOC101487688 coding downstream 510872 6727928 ~ 6763797 (+)
G1897 NA non-coding upstream 78288 6039592 ~ 6130467 (+)
G1906 NA non-coding upstream 82222 6125367 ~ 6126533 (+)
G1905 NA non-coding upstream 89226 6119047 ~ 6119529 (+)
G1898 NA non-coding upstream 97154 6111214 ~ 6111601 (+)
G1900 NA non-coding upstream 145118 6062128 ~ 6063637 (+)
G1915 NA non-coding downstream 17287 6234343 ~ 6288169 (+)
LOC120564462 NA non-coding downstream 41333 6258389 ~ 6261729 (+)
LOC120568420 NA non-coding downstream 45268 6262324 ~ 6265186 (+)
G1926 NA non-coding downstream 56780 6273836 ~ 6275510 (+)
G1927 NA non-coding downstream 58617 6275673 ~ 6316732 (+)
snrpb2 snrpb2 other upstream 292381 5876547 ~ 5916374 (+)
acaa1 acaa1,LOC102793903 other upstream 737346 5387393 ~ 5471409 (+)
G1775 NA other upstream 833848 5372617 ~ 5374907 (+)
LOC120563544 LOC100708833,LOC102313704,LOC101466655,LOC102192550 other upstream 880838 5235346 ~ 5327917 (+)
G1756 NA other upstream 986011 5218068 ~ 5222744 (+)
LOC120573424 lgalsl,LOC104947409 other downstream 168545 6385601 ~ 6402640 (+)
aftpha LOC102296338,LOC102796226,LOC101483123,LOC102200161 other downstream 190344 6407400 ~ 6437217 (+)
G1973 NA other downstream 315385 6532441 ~ 6534370 (+)
G2530 NA other downstream 1482209 7699265 ~ 7699540 (+)
G2557 NA other downstream 1724491 7941547 ~ 7948253 (+)

Expression


Co-expression Network