G1898


Basic Information

Item Value
gene id G1898
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 6111214 ~ 6111601 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU2640
gtgcattctgggcatgctggtcttacagggaggtgtgttcaggtgcattctgggcgtgctggtcttacagggaggtgtgttcaggtgcattctgggagtattgctatcttgaggcagcgggaagtgatcgcaccattgaccaacaaaaacctggtctaaagtcaataactcagcatttcattgttattttaacagagcatta

Function

GO:

id name namespace
GO:0005085 guanyl-nucleotide exchange factor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2640 True 202 lncRNA 0.46 2 6111214 6111601

Neighbor

gene id symbol gene type direction distance location
LOC120563868 NA coding upstream 1774 6105145 ~ 6109440 (+)
LOC120563871 NA coding upstream 17487 6088852 ~ 6093727 (+)
prokr1a LOC103383410,LOC101078632 coding upstream 52625 6039211 ~ 6058589 (+)
LOC120563910 NA coding upstream 307980 5790297 ~ 5803234 (+)
LOC120564476 NA coding upstream 503413 5606454 ~ 5607801 (+)
LOC120563973 NA coding downstream 8793 6120394 ~ 6127443 (+)
LOC120563935 NA coding downstream 21034 6132635 ~ 6146027 (+)
cnrip1a cnrip1,LOC102194292,LOC107094923,LOC101465016,LOC100711692,LOC106535151,LOC104918542 coding downstream 36779 6148380 ~ 6157391 (+)
ppp3r1b PPP3R1,ppp3r1,ppp3r1b,LOC101071292,LOC108441257,LOC107727894,LOC106024317,LOC107699153,LOC107594412,LOC107680167 coding downstream 51805 6163406 ~ 6232599 (+)
LOC120569490 LOC105918390 coding downstream 226702 6338303 ~ 6377691 (+)
G1900 NA non-coding upstream 47577 6062128 ~ 6063637 (+)
G1825 NA non-coding upstream 80021 5982165 ~ 6031193 (+)
G1831 LOC103463036 non-coding upstream 89194 6004393 ~ 6022020 (+)
G1840 NA non-coding upstream 94573 5960215 ~ 6016641 (+)
G1833 LOC104946033 non-coding upstream 127146 5971225 ~ 5984068 (+)
G1905 NA non-coding downstream 7446 6119047 ~ 6119529 (+)
G1906 NA non-coding downstream 13766 6125367 ~ 6126533 (+)
G1826 NA non-coding downstream 97154 6208755 ~ 6217056 (+)
G1915 NA non-coding downstream 122742 6234343 ~ 6288169 (+)
LOC120564462 NA non-coding downstream 146788 6258389 ~ 6261729 (+)
snrpb2 snrpb2 other upstream 194840 5876547 ~ 5916374 (+)
acaa1 acaa1,LOC102793903 other upstream 639805 5387393 ~ 5471409 (+)
G1775 NA other upstream 736307 5372617 ~ 5374907 (+)
LOC120563544 LOC100708833,LOC102313704,LOC101466655,LOC102192550 other upstream 783297 5235346 ~ 5327917 (+)
G1756 NA other upstream 888470 5218068 ~ 5222744 (+)
LOC120573424 lgalsl,LOC104947409 other downstream 274000 6385601 ~ 6402640 (+)
aftpha LOC102296338,LOC102796226,LOC101483123,LOC102200161 other downstream 295799 6407400 ~ 6437217 (+)
G1973 NA other downstream 420840 6532441 ~ 6534370 (+)
G2530 NA other downstream 1587664 7699265 ~ 7699540 (+)
G2557 NA other downstream 1829946 7941547 ~ 7948253 (+)

Expression


Co-expression Network