G1906


Basic Information

Item Value
gene id G1906
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 6125367 ~ 6126533 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU2651
tgtgGTAACCTCCtattgtcaattaaaggcctgtCTCTTATAGACGCCTGTCTCAAATACAAGCCGGTGCATTTCGGCGATTTGGGTAAATAGAAGCCcgggctattatttgaagttttacggtaattccactaattaaccctgacaaagcacacctgtgaaggtaaaaccatttcaggtgactacctcatgaagctcattgagagaacaccaagggtttgcagagttatcaaaaaccTGCAACCCTTATTAATGACCTATTAGTGATTTAGTTTAAGCCATCTTCTTATATTTCCATGGGATCATTATCTGTTTACCGGCCTCTGTGTTTTCCATCTTCTGTCCAGCACCAAGTATTTACTGTCTGGATGTGTTTTTGTAAACCCTTTAGCATCAACTTTTAAGAAACAAACaaatccccccccacccccccacacacacagaaacaggtgAGTAACACgtcatgaatgaatgaattaatgtaatgtaatgtaatgtaatgtagtgtaAAAAATATCTGTCCTCTcccaaaagaaaaacactccCGTAGGGTCGTTTGTTCCAGCAGCGATTACGACTcgtgtgtatgtctgtggtggcggcgccctctagtggccgcaGTAGTTCTGAGGGGAAGTATAAGAGCGCAAAATGTCCCGGTAAAACTTGGTTTATGGCCCTGCAGAGGCCCCACGCAGAGATTTCACCgcagcctacgtaagtggcctgaagtctAGACTTGTGCGTTGATCTCAgcagggtgtgtgtgcgtgtgcgtgtgtgcgtgtgtgtgtgtgtgtcaacgccacgtggtaaccttcaggaagtgaagtgacgtctgatttgaacccaaacctccatcttATGATCAACTTAACTCAAAACTaaagttttggtgtctaaaccaTAACCGAACTGGGACCGTTTTCACAACGTACCCCATTTGAAtagtgtttttaagccaagttgCCCCCTGgccagcgatagatttaccaaacagcctgaaagacattttaaatgctgatgaaaaaAGGGCGACAAAAAGTCGGTAGAAAGAAGAAtagaataggtcgaaaatagtgacaggaagcgacaaaaacattgaaaaagcgacaaacttggagaaaaaaaagatagtaGAAATAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2651 True 1147 lncRNA 0.50 2 6125367 6126533

Neighbor

gene id symbol gene type direction distance location
LOC120563868 NA coding upstream 15927 6105145 ~ 6109440 (+)
LOC120563871 NA coding upstream 31640 6088852 ~ 6093727 (+)
prokr1a LOC103383410,LOC101078632 coding upstream 66778 6039211 ~ 6058589 (+)
LOC120563910 NA coding upstream 322133 5790297 ~ 5803234 (+)
LOC120564476 NA coding upstream 517566 5606454 ~ 5607801 (+)
LOC120563935 NA coding downstream 6102 6132635 ~ 6146027 (+)
cnrip1a cnrip1,LOC102194292,LOC107094923,LOC101465016,LOC100711692,LOC106535151,LOC104918542 coding downstream 21847 6148380 ~ 6157391 (+)
ppp3r1b PPP3R1,ppp3r1,ppp3r1b,LOC101071292,LOC108441257,LOC107727894,LOC106024317,LOC107699153,LOC107594412,LOC107680167 coding downstream 36873 6163406 ~ 6232599 (+)
LOC120569490 LOC105918390 coding downstream 211770 6338303 ~ 6377691 (+)
LOC120565047 actr2,actr2a,LOC107583198,LOC104930021,LOC108423375 coding downstream 383692 6510225 ~ 6528948 (+)
G1905 NA non-coding upstream 5838 6119047 ~ 6119529 (+)
G1898 NA non-coding upstream 13766 6111214 ~ 6111601 (+)
G1900 NA non-coding upstream 61730 6062128 ~ 6063637 (+)
G1825 NA non-coding upstream 94174 5982165 ~ 6031193 (+)
G1831 LOC103463036 non-coding upstream 103347 6004393 ~ 6022020 (+)
G1826 NA non-coding downstream 82222 6208755 ~ 6217056 (+)
G1915 NA non-coding downstream 107810 6234343 ~ 6288169 (+)
LOC120564462 NA non-coding downstream 131856 6258389 ~ 6261729 (+)
LOC120568420 NA non-coding downstream 135791 6262324 ~ 6265186 (+)
G1926 NA non-coding downstream 147303 6273836 ~ 6275510 (+)
snrpb2 snrpb2 other upstream 208993 5876547 ~ 5916374 (+)
acaa1 acaa1,LOC102793903 other upstream 653958 5387393 ~ 5471409 (+)
G1775 NA other upstream 750460 5372617 ~ 5374907 (+)
LOC120563544 LOC100708833,LOC102313704,LOC101466655,LOC102192550 other upstream 797450 5235346 ~ 5327917 (+)
G1756 NA other upstream 902623 5218068 ~ 5222744 (+)
LOC120573424 lgalsl,LOC104947409 other downstream 259068 6385601 ~ 6402640 (+)
aftpha LOC102296338,LOC102796226,LOC101483123,LOC102200161 other downstream 280867 6407400 ~ 6437217 (+)
G1973 NA other downstream 405908 6532441 ~ 6534370 (+)
G2530 NA other downstream 1572732 7699265 ~ 7699540 (+)
G2557 NA other downstream 1815014 7941547 ~ 7948253 (+)

Expression


Co-expression Network