G176 (LOC104946033)


Basic Information

Item Value
gene id G176
gene name LOC104946033
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 583390 ~ 598207 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU271
AAAcctctggagctgttctgtaagaccgaccagacatgtgtctgcatgctctgcACTGTTTTAGACCACAAGATGCATGATGTTGTTCCTCTGAATGAAGGCTATGAAGGAAAGAAGGCAGAGCTGGGGAAGACAGAGGCTGAAATACagcagatgatccagaagagacgactgaagattcaggagatcaaacactcagtcaacctcagtgaggaagatgcagacagagagatagcagaaggtgttcaggtcttcacttctctgaaggagtctgttgagagaggcctgaatgagctcatcgacacgatcaaagagaagcagaaaacaacagaaaaacaggccgaagctttcatcaaagagctggaacaggaaatctctgagctgatgaagagaagcactgaggtggagcagGTGTTACGCTCTGAAGaccacctccatcttctccagagtGTCCAGTCCCTAAACATCCAACAACCTCCACCCACCAAGGACTGGACAGAGGTCAGCGT

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM39-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU271 True 509 TUCP 0.40 2 583390 598207

Neighbor

gene id symbol gene type direction distance location
LOC120566458 NA coding upstream 27547 486626 ~ 555843 (+)
LOC120566597 NA coding upstream 73918 486627 ~ 509472 (+)
LOC120566531 NA coding upstream 89108 486612 ~ 494282 (+)
LOC120566520 NA coding upstream 109726 470745 ~ 473664 (+)
LOC120566701 NA coding upstream 120527 458378 ~ 462863 (+)
LOC120566389 NA coding downstream 16008 614215 ~ 619099 (+)
LOC120566319 NA coding downstream 24173 622380 ~ 1125737 (+)
LOC120566631 NA coding downstream 24178 622385 ~ 639007 (+)
LOC120566616 NA coding downstream 24244 622451 ~ 626465 (+)
LOC120566667 NA coding downstream 34543 632750 ~ 807043 (+)
G221 NA non-coding upstream 60401 522532 ~ 522989 (+)
G55 NA non-coding upstream 172928 409741 ~ 410462 (+)
G50 LOC104942424 non-coding upstream 196742 370651 ~ 386648 (+)
G49 NA non-coding upstream 214093 369028 ~ 369297 (+)
G48 NA non-coding upstream 237483 345628 ~ 345907 (+)
G261 NA non-coding downstream 88238 686445 ~ 692229 (+)
G270 LOC103372508 non-coding downstream 210354 808561 ~ 811947 (+)
G195 NA non-coding downstream 286900 885107 ~ 1195250 (+)
LOC120566926 NA non-coding downstream 293414 891621 ~ 892123 (+)
G281 NA non-coding downstream 369123 967330 ~ 968520 (+)
G184 NA other upstream 101500 477971 ~ 481890 (+)
rrp36 rrp36 other upstream 262611 291233 ~ 320779 (+)
fbxo3 NA other upstream 345651 70004 ~ 237739 (+)
LOC120560073 LOC103372506,LOC102203670,LOC101482513,LOC102296948 other upstream 358794 200413 ~ 224596 (+)
LOC120560058 NA other upstream 401087 158391 ~ 182303 (+)
LOC120566394 NA other downstream 109946 708153 ~ 753762 (+)
LOC120566368 NA other downstream 309633 907840 ~ 1012869 (+)
LOC120566414 LOC104946033 other downstream 328099 926306 ~ 1011615 (+)
G199 NA other downstream 418700 1016907 ~ 1019038 (+)
G292 NA other downstream 518417 1116624 ~ 1144413 (+)

Expression


Co-expression Network