G1941


Basic Information

Item Value
gene id G1941
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 6348780 ~ 6349582 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU2724
gacagctagctagactatctgtctgtctgtctgtctgtctgtctaactggtcctcagatctctgcagggtaaatccagacagctagctagactatctgtctgtctgtctgtctgtctaacagctcctcagatctctgcagggtaaatccagacagctagctagactatctgtctgtctgtctgtctaactggtcctcagatctctgcagggtaaatccagacagctagctagactatctgtctgtctgtctgtctgtctgtctgtctaactgctcctcagatctctgcagggtaaatccagacagctagctagactatctgtctgtctgtctgtctgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2724 True 338 lncRNA 0.60 2 6348780 6349582

Neighbor

gene id symbol gene type direction distance location
ppp3r1b PPP3R1,ppp3r1,ppp3r1b,LOC101071292,LOC108441257,LOC107727894,LOC106024317,LOC107699153,LOC107594412,LOC107680167 coding upstream 116181 6163406 ~ 6232599 (+)
cnrip1a cnrip1,LOC102194292,LOC107094923,LOC101465016,LOC100711692,LOC106535151,LOC104918542 coding upstream 191389 6148380 ~ 6157391 (+)
LOC120563935 NA coding upstream 202753 6132635 ~ 6146027 (+)
LOC120563973 NA coding upstream 221337 6120394 ~ 6127443 (+)
LOC120563868 NA coding upstream 239340 6105145 ~ 6109440 (+)
LOC120565047 actr2,actr2a,LOC107583198,LOC104930021,LOC108423375 coding downstream 160643 6510225 ~ 6528948 (+)
LOC120568096 LOC104918539,LOC100694188,LOC102198854,LOC101483894 coding downstream 241854 6591436 ~ 6659319 (+)
LOC120564833 mdha,mdh1,LOC107382285,LOC106536176 coding downstream 346002 6695584 ~ 6722958 (+)
LOC120564849 ugp2,LOC100710204,LOC101487688 coding downstream 378346 6727928 ~ 6763797 (+)
LOC120569765 NA coding downstream 447884 6797466 ~ 6797580 (+)
G1927 NA non-coding upstream 32048 6275673 ~ 6316732 (+)
G1915 NA non-coding upstream 60611 6234343 ~ 6288169 (+)
G1926 NA non-coding upstream 73270 6273836 ~ 6275510 (+)
LOC120568420 NA non-coding upstream 83594 6262324 ~ 6265186 (+)
LOC120564462 NA non-coding upstream 87051 6258389 ~ 6261729 (+)
G1932 NA non-coding downstream 16907 6366489 ~ 6466386 (+)
G1936 NA non-coding downstream 43494 6393076 ~ 6393584 (+)
G1983 NA non-coding downstream 208024 6557606 ~ 6557845 (+)
G2230 NA non-coding downstream 232543 6582125 ~ 6582434 (+)
G2241 NA non-coding downstream 282091 6631673 ~ 6632069 (+)
snrpb2 snrpb2 other upstream 432406 5876547 ~ 5916374 (+)
acaa1 acaa1,LOC102793903 other upstream 877371 5387393 ~ 5471409 (+)
G1775 NA other upstream 973873 5372617 ~ 5374907 (+)
LOC120563544 LOC100708833,LOC102313704,LOC101466655,LOC102192550 other upstream 1020863 5235346 ~ 5327917 (+)
G1756 NA other upstream 1126036 5218068 ~ 5222744 (+)
LOC120573424 lgalsl,LOC104947409 other downstream 36019 6385601 ~ 6402640 (+)
aftpha LOC102296338,LOC102796226,LOC101483123,LOC102200161 other downstream 57818 6407400 ~ 6437217 (+)
G1973 NA other downstream 182859 6532441 ~ 6534370 (+)
G2530 NA other downstream 1349683 7699265 ~ 7699540 (+)
G2557 NA other downstream 1591965 7941547 ~ 7948253 (+)

Expression


Co-expression Network